RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PIK3AP1Q6ZUJ8 805 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 BLIDQ8IZY5 108 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 DAGLBQ8NCG7 672 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 KLHDC9Q8NEP7 349 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 CCDC148Q8NFR7 591 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 INPP4AQ96PE3 977 aaPredicted RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 IWS1Q96ST2 819 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 SENP6Q9GZR1 1112 aaPredicted RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 UPF3AQ9H1J1 476 aaKnown RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 C6orf50Q9HD87 102 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 DDX41Q9UJV9 622 aaKnown RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 UBIAD1Q9Y5Z9 338 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 PDE4DIPQ5VU43 2346 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 SCN10AQ9Y5Y9 1956 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 A0A1W2PQ45 241 aaPredicted RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 A0A1W2PQY0 241 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 DNM1LO00429 736 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 DUSP11O75319 330 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 EIF3JO75822 258 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 MMP1P03956 469 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 ASGR1P07306 291 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 MMP3P08254 477 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 MYL3P08590 195 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 KCNA2P16389 499 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 ACLYP53396 1101 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 CHMP4BP1P59074 171 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 AP3B2Q13367 1082 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 TTLL4Q14679 1199 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 FSCN1Q16658 493 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 HSDL1Q3SXM5 330 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 DIS3L2Q8IYB7 885 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 TBCKQ8TEA7 893 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 SCFD2Q8WU76 684 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 LENG9Q96B70 501 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 ZSCAN31Q96LW9 406 aaPredicted RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 C11orf49Q9H6J7 331 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 SH3GLB2Q9NR46 395 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 MAP3K20Q9NYL2 800 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 LAMA2P24043 3122 aaKnown RBP9.02□□□□□ -0.97
CCDC40-215ENST00000576033 GRIN2DO15399 1336 aa9.02□□□□□ -0.97
CCDC40-215ENST00000576033 SIP14410 1827 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 SPATA31C2B4DYI2 1134 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 KRT2P35908 639 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 TRAF1Q13077 416 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-215ENST00000576033 MTMR1Q13613 665 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 HIC1Q14526 733 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 NFKBIBQ15653 356 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 TRIM60Q495X7 471 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 PRR16Q569H4 304 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 IQSEC1Q6DN90 963 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 CLEC17AQ6ZS10 378 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 CCDC12Q8WUD4 166 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-215ENST00000576033 INTS4Q96HW7 963 aaKnown RBP9.01□□□□□ -0.97
CCDC40-215ENST00000576033 C8orf76Q96K31 380 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 MXRA8Q9BRK3 442 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 LLPHQ9BRT6 129 aaKnown RBP9.01□□□□□ -0.97
CCDC40-215ENST00000576033 AGO4Q9HCK5 861 aaKnown RBP9.01□□□□□ -0.97
CCDC40-215ENST00000576033 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 PHF24Q9UPV7 400 aa9.01□□□□□ -0.97
CCDC40-215ENST00000576033 TRIP12Q14669 1992 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-215ENST00000576033 TANC1Q9C0D5 1861 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 LOC102724159A0A0B4J2E5 919 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 KBTBD13C9JR72 458 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 FIBPO43427 364 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 MSCO60682 206 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 CCNE2O96020 404 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 GH1P01241 217 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 SYN1P17600 705 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 CST5P28325 142 aaPredicted RBP9□□□□□ -0.97
CCDC40-215ENST00000576033 GNA11P29992 359 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 ICAM3P32942 547 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 RGS19P49795 217 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 PURAQ00577 322 aaKnown RBP9□□□□□ -0.97
CCDC40-215ENST00000576033 PWP2Q15269 919 aaKnown RBP9□□□□□ -0.97
CCDC40-215ENST00000576033 LETM2Q2VYF4 491 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 GNASQ5JWF2 1037 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 CELF3Q5SZQ8 465 aaKnown RBP9□□□□□ -0.97
CCDC40-215ENST00000576033 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 RNF180Q86T96 592 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 PLA2G4DQ86XP0 818 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 C7orf61Q8IZ16 206 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 SAMD3Q8N6K7 520 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 FAM184AQ8NB25 1140 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 KAT2BQ92831 832 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 ZBTB10Q96DT7 871 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 AP5M1Q9H0R1 490 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 KCNH7Q9NS40 1196 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 ATP11BQ9Y2G3 1177 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 SCN5AQ14524 2016 aa9□□□□□ -0.97
CCDC40-215ENST00000576033 ARID2Q68CP9 1835 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 SZT2Q5T011 3432 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 MSH4O15457 936 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 PQBP1O60828 265 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms