RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
CCDC40-214ENST00000575431 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
CCDC40-214ENST00000575431 RTEL1Q9NZ71 1219 aa10.9□□□□□ -0.66
CCDC40-214ENST00000575431 KCNJ14Q9UNX9 436 aa10.9□□□□□ -0.66
CCDC40-214ENST00000575431 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
CCDC40-214ENST00000575431 SMC3Q9UQE7 1217 aa10.9□□□□□ -0.66
CCDC40-214ENST00000575431 A6NJR5 290 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 K7ELQ4 463 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 MEIS1O00470 390 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 ADCY6O43306 1168 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 COL6A1P12109 1028 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 ITGB5P18084 799 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 CIITAP33076 1130 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 SETQ01105 290 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 NPY5RQ15761 445 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 FSCN1Q16658 493 aaKnown RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 GJC2Q5T442 439 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 KRT40Q6A162 431 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 FBXO18Q8NFZ0 1043 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 INTS4Q96HW7 963 aaKnown RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 PAWRQ96IZ0 340 aaKnown RBP10.89□□□□□ -0.67
CCDC40-214ENST00000575431 PGBD1Q96JS3 809 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 GLT1D1Q96MS3 346 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 MLXIPQ9HAP2 919 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
CCDC40-214ENST00000575431 ELP1O95163 1332 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 CTAGE5O15320 804 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 ARIH2O95376 493 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 ASGR1P07306 291 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 GCFC2P16383 781 aaKnown RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 PDCP20941 246 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 ACLYP53396 1101 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 ARHGAP1Q07960 439 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 KCNA10Q16322 511 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 LY6KQ17RY6 165 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 CELF3Q5SZQ8 465 aaKnown RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 CCSAPQ6IQ19 270 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 METTL7BQ6UX53 244 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 DIS3L2Q8IYB7 885 aaKnown RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 RASGRP4Q8TDF6 673 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 TBCKQ8TEA7 893 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 SENP6Q9GZR1 1112 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 KCNH7Q9NS40 1196 aa10.88□□□□□ -0.67
CCDC40-214ENST00000575431 KIAA0100Q14667 2235 aaKnown RBP10.88□□□□□ -0.67
CCDC40-214ENST00000575431 NFASCO94856 1347 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 CYP3A7-CYP3A51PA0A087WV96 503 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 GGPS1O95749 300 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
CCDC40-214ENST00000575431 UBA1P22314 1058 aaKnown RBP10.87□□□□□ -0.67
CCDC40-214ENST00000575431 CYP3A7P24462 503 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 GJB2P29033 226 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 MLLT1Q03111 559 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-214ENST00000575431 DGKDQ16760 1214 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 C1orf53Q5VUE5 145 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 PLA2G4DQ86XP0 818 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 PPTC7Q8NI37 304 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 LENG1Q96BZ8 264 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-214ENST00000575431 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-214ENST00000575431 SPATA33Q96N06 139 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 SDF4Q9BRK5 362 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 FOXP1Q9H334 677 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-214ENST00000575431 STARD7Q9NQZ5 370 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 GJB4Q9NTQ9 266 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 TBC1D22BQ9NU19 505 aa10.87□□□□□ -0.67
CCDC40-214ENST00000575431 MYH7BA7E2Y1 1941 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 A0A1W2PQ45 241 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-214ENST00000575431 A0A1W2PQY0 241 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 BTBD18B2RXH4 712 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 FAM86B1E9PN63 330 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 NOP56O00567 594 aaKnown RBP10.86□□□□□ -0.67
CCDC40-214ENST00000575431 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 MMP3P08254 477 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 KCNA2P16389 499 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 BEX3Q00994 111 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 SP2Q02086 613 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 GNL2Q13823 731 aaKnown RBP10.86□□□□□ -0.67
CCDC40-214ENST00000575431 Q4G0T1 1027 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 TMEM63BQ5T3F8 832 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 PPP4R3AQ6IN85 833 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 PIK3AP1Q6ZUJ8 805 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 DIS3LQ8TF46 1054 aaKnown RBP10.86□□□□□ -0.67
CCDC40-214ENST00000575431 AFG1LQ8WV93 481 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 COPS5Q92905 334 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-214ENST00000575431 KATNAL1Q9BW62 490 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
CCDC40-214ENST00000575431 MROH7Q68CQ1 1323 aa10.85□□□□□ -0.67
CCDC40-214ENST00000575431 MYADML2A6NDP7 307 aa10.85□□□□□ -0.67
CCDC40-214ENST00000575431 H3BQV1 296 aa10.85□□□□□ -0.67
CCDC40-214ENST00000575431 DTNBO60941 627 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms