RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	RBPJL	Q9UBG7	517 aa		11.31	□□□□□ -0.6
NXN-208	ENST00000575171	RBM19	Q9Y4C8	960 aa	Known RBP	11.31	□□□□□ -0.6
NXN-208	ENST00000575171	CYP46A1	Q9Y6A2	500 aa		11.31	□□□□□ -0.6
NXN-208	ENST00000575171	LAMA2	P24043	3122 aa	Known RBP	11.31	□□□□□ -0.6
NXN-208	ENST00000575171	MYPN	Q86TC9	1320 aa		11.31	□□□□□ -0.6
NXN-208	ENST00000575171	WDR19	Q8NEZ3	1342 aa		11.31	□□□□□ -0.6
NXN-208	ENST00000575171	BACH1	O14867	736 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	DHX16	O60231	1041 aa	Known RBP	11.3	□□□□□ -0.6
NXN-208	ENST00000575171	ZBED4	O75132	1171 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	SNHG28	P0DPA3	235 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	RXRA	P19793	462 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	ANAPC15	P60006	121 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	ERVK-24	P63145	666 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	TLR1	Q15399	786 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	SYDE2	Q5VT97	1194 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	WDR78	Q5VTH9	848 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	LBX2	Q6XYB7	198 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	RUFY3	Q7L099	469 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	PRICKLE2	Q7Z3G6	844 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	NBPF11	Q86T75	865 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	CCDC144CP	Q8IYA2	1237 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	ZNF654	Q8IZM8	581 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	SIX5	Q8N196	739 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	TMTC2	Q8N394	836 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	PRPF38A	Q8NAV1	312 aa	Known RBP	11.3	□□□□□ -0.6
NXN-208	ENST00000575171	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
NXN-208	ENST00000575171	GPRC5A	Q8NFJ5	357 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	C22orf23	Q9BZE7	217 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	BTBD7	Q9P203	1132 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	MORF4L1	Q9UBU8	362 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	RABGAP1	Q9Y3P9	1069 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	SLC12A7	Q9Y666	1083 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	MYH8	P13535	1937 aa		11.3	□□□□□ -0.6
NXN-208	ENST00000575171	KLF18	A0A0U1RQI7	1052 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	VWA5A	O00534	786 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	CNMD	O75829	334 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	DDAH1	O94760	285 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	LIFR	P42702	1097 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	SNAP25	P60880	206 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	CCNA1	P78396	465 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	GRM4	Q14833	912 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	ASPRV1	Q53RT3	343 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	GPATCH4	Q5T3I0	446 aa	Known RBP	11.29	□□□□□ -0.6
NXN-208	ENST00000575171	CCDC174	Q6PII3	467 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	MICU3	Q86XE3	530 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	CPXCR1	Q8N123	301 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	MB21D1	Q8N884	522 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	CTCFL	Q8NI51	663 aa	Predicted RBP	11.29	□□□□□ -0.6
NXN-208	ENST00000575171	BRF1	Q92994	677 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	TM6SF1	Q9BZW5	370 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	UBA5	Q9GZZ9	404 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	CPVL	Q9H3G5	476 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	PDRG1	Q9NUG6	133 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	ZNF358	Q9NW07	568 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	SERTAD1	Q9UHV2	236 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	PRR12	Q9ULL5	1215 aa		11.29	□□□□□ -0.6
NXN-208	ENST00000575171	PLA2G6	O60733	806 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	PSMC4	P43686	418 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	FCGRT	P55899	365 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	APOBR	Q0VD83	1088 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	PTK7	Q13308	1070 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	TMEM132B	Q14DG7	1078 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	ARHGEF6	Q15052	776 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	MTFR1	Q15390	333 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	CRTC2	Q53ET0	693 aa	Predicted RBP	11.28	□□□□□ -0.6
NXN-208	ENST00000575171	SGMS1	Q86VZ5	419 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	NCAPG2	Q86XI2	1143 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	STAG2	Q8N3U4	1231 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	SPATC1L	Q9H0A9	340 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	RAVER2	Q9HCJ3	691 aa	Known RBP	11.28	□□□□□ -0.6
NXN-208	ENST00000575171	VAT1L	Q9HCJ6	419 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	VCAN	P13611	3396 aa		11.28	□□□□□ -0.6
NXN-208	ENST00000575171	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.27	□□□□□ -0.61
NXN-208	ENST00000575171	GOLGA8A	A7E2F4	631 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	GOLGA8B	A8MQT2	603 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	KLRF2	D3W0D1	207 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	TNPO2	O14787	897 aa	Known RBP	11.27	□□□□□ -0.61
NXN-208	ENST00000575171	ZBTB43	O43298	467 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	CALM1	P0DP23	149 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	CALM2	P0DP24	149 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	CALM3	P0DP25	149 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	KIF5B	P33176	963 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	STAT3	P40763	770 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	SMTN	P53814	917 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	PRMT2	P55345	433 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	TROAP	Q12815	778 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	SNRNP48	Q6IEG0	339 aa	Known RBP	11.27	□□□□□ -0.61
NXN-208	ENST00000575171	TMEM214	Q6NUQ4	689 aa	Known RBP	11.27	□□□□□ -0.61
NXN-208	ENST00000575171	BTNL9	Q6UXG8	535 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	NOL8	Q76FK4	1167 aa	Known RBP	11.27	□□□□□ -0.61
NXN-208	ENST00000575171	REPS2	Q8NFH8	660 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.27	□□□□□ -0.61
NXN-208	ENST00000575171	BACH2	Q9BYV9	841 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	PORCN	Q9H237	461 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	SLC38A10	Q9HBR0	1119 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	MAD2L2	Q9UI95	211 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	BRPF3	Q9ULD4	1205 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	ADAMTS5	Q9UNA0	930 aa		11.27	□□□□□ -0.61
NXN-208	ENST00000575171	SPATA31C2	B4DYI2	1134 aa		11.26	□□□□□ -0.61
NXN-208	ENST00000575171	TAL1	P17542	331 aa	Predicted RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms