RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 ADAMTS4O75173 837 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 FARP2O94887 1054 aaPredicted RBP18.52■□□□□ 0.56
PFN1-203ENST00000574872 HSP90AA1P07900 732 aaKnown RBP18.52■□□□□ 0.56
PFN1-203ENST00000574872 FAM86B2P0C5J1 330 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 BEX3Q00994 111 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 SP2Q02086 613 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 MTMR1Q13613 665 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
PFN1-203ENST00000574872 LRRC41Q15345 812 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 CEP55Q53EZ4 464 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 SPRYD3Q8NCJ5 442 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 TNFRSF25Q93038 417 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 UIMC1Q96RL1 719 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 SPC25Q9HBM1 224 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 JADE2Q9NQC1 790 aa18.52■□□□□ 0.56
PFN1-203ENST00000574872 H3BQV1 296 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 NKRFO15226 690 aaKnown RBP eCLIP18.51■□□□□ 0.552e-13■■□□□ 13.2
PFN1-203ENST00000574872 EDIL3O43854 480 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 CYP3A4P08684 503 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 ICAM3P32942 547 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 MNX1P50219 401 aaPredicted RBP18.51■□□□□ 0.55
PFN1-203ENST00000574872 GJA9P57773 515 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 IFFO2Q5TF58 517 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
PFN1-203ENST00000574872 KCNV1Q6PIU1 500 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 RNF180Q86T96 592 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 ARRDC4Q8NCT1 418 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 GPRASP2Q96D09 838 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 INTS4Q96HW7 963 aaKnown RBP18.51■□□□□ 0.55
PFN1-203ENST00000574872 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
PFN1-203ENST00000574872 BCAS3Q9H6U6 928 aa18.51■□□□□ 0.55
PFN1-203ENST00000574872 KIF28PB7ZC32 967 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 KBTBD13C9JR72 458 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 CTAGE5O15320 804 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 TDP2O95551 362 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 GGPS1O95749 300 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 GH1P01241 217 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 ARP10275 920 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 ARHGAP1Q07960 439 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 FSCN1Q16658 493 aaKnown RBP18.5■□□□□ 0.55
PFN1-203ENST00000574872 LETM2Q2VYF4 491 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 PRR16Q569H4 304 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 GNASQ5JWF2 1037 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 MCTP1Q6DN14 999 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 PLA2G4DQ86XP0 818 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 PAWRQ96IZ0 340 aaKnown RBP18.5■□□□□ 0.55
PFN1-203ENST00000574872 KCNH7Q9NS40 1196 aa18.5■□□□□ 0.55
PFN1-203ENST00000574872 DNM1LO00429 736 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 MEIS1O00470 390 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 ATP9AO75110 1047 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 TGFB3P10600 412 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 USP11P51784 963 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 SP4Q02446 784 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 CYFIP1Q7L576 1253 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 NEK8Q86SG6 692 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 DHX37Q8IY37 1157 aaKnown RBP18.49■□□□□ 0.55
PFN1-203ENST00000574872 ANKLE1Q8NAG6 615 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 KLHDC9Q8NEP7 349 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 AFG1LQ8WV93 481 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 CDHR1Q96JP9 859 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 Q9Y3F1 56 aa18.49■□□□□ 0.55
PFN1-203ENST00000574872 MKI67P46013 3256 aaKnown RBP18.48■□□□□ 0.55
PFN1-203ENST00000574872 IGLV3-22A0A075B6J6 115 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 KCNA2P16389 499 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 CIITAP33076 1130 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 KCNA10Q16322 511 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 CELF3Q5SZQ8 465 aaKnown RBP18.48■□□□□ 0.55
PFN1-203ENST00000574872 FERMT2Q96AC1 680 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 SPATA33Q96N06 139 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 FOXP1Q9H334 677 aaPredicted RBP18.48■□□□□ 0.55
PFN1-203ENST00000574872 MLXIPQ9HAP2 919 aa18.48■□□□□ 0.55
PFN1-203ENST00000574872 AGO4Q9HCK5 861 aaKnown RBP18.48■□□□□ 0.55
PFN1-203ENST00000574872 VPS37CA5D8V6 355 aaPredicted RBP18.47■□□□□ 0.55
PFN1-203ENST00000574872 MYL3P08590 195 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 ATP2B1P20020 1258 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 CST5P28325 142 aaPredicted RBP18.47■□□□□ 0.55
PFN1-203ENST00000574872 CPT1AP50416 773 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 SETQ01105 290 aaPredicted RBP18.47■□□□□ 0.55
PFN1-203ENST00000574872 LAMC2Q13753 1193 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 NEDD9Q14511 834 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 MYSM1Q5VVJ2 828 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 CCSAPQ6IQ19 270 aaPredicted RBP18.47■□□□□ 0.55
PFN1-203ENST00000574872 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 LENG9Q96B70 501 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 TELO2Q9Y4R8 837 aa18.47■□□□□ 0.55
PFN1-203ENST00000574872 DDX39AO00148 427 aaKnown RBP18.46■□□□□ 0.55
PFN1-203ENST00000574872 WNT7AO00755 349 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 MAFGO15525 162 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 CCNT1O60563 726 aaKnown RBP18.46■□□□□ 0.55
PFN1-203ENST00000574872 ASGR1P07306 291 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 ITGB3BPQ13352 177 aaPredicted RBP18.46■□□□□ 0.55
PFN1-203ENST00000574872 CXCL17Q6UXB2 119 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 NECAB2Q7Z6G3 386 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 EMID1Q96A84 441 aaPredicted RBP18.46■□□□□ 0.55
PFN1-203ENST00000574872 SENP7Q9BQF6 1050 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 SENP6Q9GZR1 1112 aaPredicted RBP18.46■□□□□ 0.55
PFN1-203ENST00000574872 C11orf49Q9H6J7 331 aa18.46■□□□□ 0.55
PFN1-203ENST00000574872 DDX25Q9UHL0 483 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms