RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MTG1Q9BT17 334 aaPredicted RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 SPZ1Q9BXG8 430 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 TRMT13Q9NUP7 481 aaKnown RBP11.55□□□□□ -0.56
RPA1-206ENST00000573994 POLR3EQ9NVU0 708 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 UMODL1Q5DID0 1318 aa11.55□□□□□ -0.56
RPA1-206ENST00000573994 GH1P01241 217 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 CD4P01730 458 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 ACRP10323 421 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 CSF2RAP15509 400 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 LIFRP42702 1097 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 GHRHRQ02643 423 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 ARHGAP1Q07960 439 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 PGM5Q15124 567 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 BRDTQ58F21 947 aaPredicted RBP11.54□□□□□ -0.56
RPA1-206ENST00000573994 FAM47CQ5HY64 1035 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 CCDC82Q8N4S0 544 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 SRBD1Q8N5C6 995 aaKnown RBP11.54□□□□□ -0.56
RPA1-206ENST00000573994 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 MAP3K14Q99558 947 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 ALDH8A1Q9H2A2 487 aaPredicted RBP11.54□□□□□ -0.56
RPA1-206ENST00000573994 MAP3K20Q9NYL2 800 aaKnown RBP11.54□□□□□ -0.56
RPA1-206ENST00000573994 SEC63Q9UGP8 760 aaKnown RBP11.54□□□□□ -0.56
RPA1-206ENST00000573994 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 MRVI1Q9Y6F6 885 aa11.54□□□□□ -0.56
RPA1-206ENST00000573994 A6NJR5 290 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
RPA1-206ENST00000573994 RGS20O76081 388 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 MMP3P08254 477 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 CPA1P15085 419 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 CCL23P55773 120 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 NBPF20Q3BBV1 942 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 MFSD5Q6N075 450 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.56
RPA1-206ENST00000573994 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 LZTS2Q9BRK4 669 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 HIPK3Q9H422 1215 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 CDH23Q9H251 3354 aa11.53□□□□□ -0.56
RPA1-206ENST00000573994 ZNF286BP0CG31 522 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 CALM1P0DP23 149 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 CALM2P0DP24 149 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 CALM3P0DP25 149 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 CYP2C9P11712 490 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 UBA1P22314 1058 aaKnown RBP11.52□□□□□ -0.57
RPA1-206ENST00000573994 CCND2P30279 289 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 GNAQP50148 359 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 PPIGQ13427 754 aaKnown RBP eCLIP11.52□□□□□ -0.57
RPA1-206ENST00000573994 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 USP17L6PQ6QN14 398 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 SGMS1Q86VZ5 419 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 TMEM199Q8N511 208 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.57
RPA1-206ENST00000573994 NOC4LQ9BVI4 516 aaKnown RBP11.52□□□□□ -0.57
RPA1-206ENST00000573994 DDX41Q9UJV9 622 aaKnown RBP11.52□□□□□ -0.57
RPA1-206ENST00000573994 BRPF3Q9ULD4 1205 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
RPA1-206ENST00000573994 COL6A3P12111 3177 aa11.52□□□□□ -0.57
RPA1-206ENST00000573994 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
RPA1-206ENST00000573994 KLF18A0A0U1RQI7 1052 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 GGPS1O95749 300 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 EXOSC10Q01780 885 aaKnown RBP11.51□□□□□ -0.57
RPA1-206ENST00000573994 KRT32Q14532 448 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 UBE2SQ16763 222 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 RTN1Q16799 776 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 SYNE3Q6ZMZ3 975 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 C16orf59Q7L2K0 433 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
RPA1-206ENST00000573994 HEATR3Q7Z4Q2 680 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 VSIG10LQ86VR7 867 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 FANCBQ8NB91 859 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 SMARCC2Q8TAQ2 1214 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
RPA1-206ENST00000573994 SCLYQ96I15 445 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
RPA1-206ENST00000573994 WNT8AQ9H1J5 351 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 FRMPD4Q14CM0 1322 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 CNTNAP5Q8WYK1 1306 aa11.51□□□□□ -0.57
RPA1-206ENST00000573994 MYH6P13533 1939 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 GOLGA8AA7E2F4 631 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 GOLGA8BA8MQT2 603 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 TK2O00142 265 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 ZBTB43O43298 467 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 KPNA6O60684 536 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 FGD1P98174 961 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 SP2Q02086 613 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 DGKDQ16760 1214 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 FAM109BQ6ICB4 259 aaPredicted RBP11.5□□□□□ -0.57
RPA1-206ENST00000573994 ZNF365Q70YC5 407 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
RPA1-206ENST00000573994 PPTC7Q8NI37 304 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 KAT2BQ92831 832 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 CUL5Q93034 780 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 MTMR10Q9NXD2 777 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
RPA1-206ENST00000573994 SNX14Q9Y5W7 946 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms