RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 TIMP1P01033 207 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 MYCLP12524 364 aaPredicted RBP16.48■□□□□ 0.23
ABR-223ENST00000573895 METAP2P50579 478 aaKnown RBP eCLIP16.48■□□□□ 0.23
ABR-223ENST00000573895 STK3Q13188 491 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 LAMC2Q13753 1193 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 LY6KQ17RY6 165 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 PPP1R18Q6NYC8 613 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
ABR-223ENST00000573895 CDKL5O76039 1030 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 MMP3P08254 477 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 MYL3P08590 195 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 ITGB8P26012 769 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 ICAM3P32942 547 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
ABR-223ENST00000573895 SCRN1Q12765 414 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 GNPTABQ3T906 1256 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 PCNX4Q63HM2 1172 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 GPR153Q6NV75 609 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 CCDC83Q8IWF9 413 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
ABR-223ENST00000573895 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
ABR-223ENST00000573895 CPLX1O14810 134 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 SUPT20HL2P0C7V6 817 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 HOXD8P13378 290 aaPredicted RBP16.46■□□□□ 0.23
ABR-223ENST00000573895 CDC27P30260 824 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 CCT2P78371 535 aaKnown RBP16.46■□□□□ 0.23
ABR-223ENST00000573895 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
ABR-223ENST00000573895 DGKDQ16760 1214 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 MFSD5Q6N075 450 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 DHX37Q8IY37 1157 aaKnown RBP16.46■□□□□ 0.23
ABR-223ENST00000573895 PPTC7Q8NI37 304 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
ABR-223ENST00000573895 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.23
ABR-223ENST00000573895 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 PPFIA4O75335 1185 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
ABR-223ENST00000573895 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
ABR-223ENST00000573895 PSMC6P62333 389 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 FPGSQ05932 587 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 CELF3Q5SZQ8 465 aaKnown RBP16.45■□□□□ 0.22
ABR-223ENST00000573895 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 BARHL2Q9NY43 387 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 SMC3Q9UQE7 1217 aa16.45■□□□□ 0.22
ABR-223ENST00000573895 SPDYE3A6NKU9 549 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 FIBPO43427 364 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 B4GALT4O60513 344 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 HMGN5P82970 282 aaKnown RBP16.44■□□□□ 0.22
ABR-223ENST00000573895 SP2Q02086 613 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 NEDD9Q14511 834 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 NBPF20Q3BBV1 942 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
ABR-223ENST00000573895 SENP7Q9BQF6 1050 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 RIC8AQ9NPQ8 531 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 PCDH10Q9P2E7 1040 aa16.44■□□□□ 0.22
ABR-223ENST00000573895 PRPF3O43395 683 aaKnown RBP16.43■□□□□ 0.22
ABR-223ENST00000573895 GGPS1O95749 300 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 FOSP01100 380 aaPredicted RBP16.43■□□□□ 0.22
ABR-223ENST00000573895 IFNAR1P17181 557 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 UBA1P22314 1058 aaKnown RBP16.43■□□□□ 0.22
ABR-223ENST00000573895 NAPAP54920 295 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 PPIGQ13427 754 aaKnown RBP eCLIP16.43■□□□□ 0.22
ABR-223ENST00000573895 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
ABR-223ENST00000573895 NLRX1Q86UT6 975 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 TMEM199Q8N511 208 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 CDHR1Q96JP9 859 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 KATNAL1Q9BW62 490 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 TRPV6Q9H1D0 765 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 EHMT1Q9H9B1 1298 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 NCOA5Q9HCD5 579 aaKnown RBP16.43■□□□□ 0.22
ABR-223ENST00000573895 KIF3AQ9Y496 699 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 DOCK5Q9H7D0 1870 aa16.43■□□□□ 0.22
ABR-223ENST00000573895 STXBP3O00186 592 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
ABR-223ENST00000573895 MAFGO15525 162 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 SCG2P13521 617 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 SHHQ15465 462 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 NTRK3Q16288 839 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 GIMAP8Q8ND71 665 aaPredicted RBP16.42■□□□□ 0.22
ABR-223ENST00000573895 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
ABR-223ENST00000573895 KAT2BQ92831 832 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 SPATA33Q96N06 139 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 HIPK3Q9H422 1215 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 PCDHA6Q9UN73 950 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 PCDHA8Q9Y5H6 950 aa16.42■□□□□ 0.22
ABR-223ENST00000573895 TRIP12Q14669 1992 aaPredicted RBP16.41■□□□□ 0.22
ABR-223ENST00000573895 ESYT2A0FGR8 921 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms