RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 TRIM6-TRIM34B2RNG4 842 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 ORC4O43929 436 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 KDM4AO75164 1064 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 ARIH2O95376 493 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 CXCL10P02778 98 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 USP46P62068 366 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 RPS6P62753 249 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 RBL2Q08999 1139 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 ALX1Q15699 326 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 BRDTQ58F21 947 aaPredicted RBP9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 FAM47CQ5HY64 1035 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 TMCO4Q5TGY1 634 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 RNF207Q6ZRF8 634 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 SESTD1Q86VW0 696 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 SCFD2Q8WU76 684 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 KAT2BQ92831 832 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 GPATCH3Q96I76 525 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 TMEM47Q9BQJ4 181 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 FTOQ9C0B1 505 aaKnown RBP eCLIP9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 ISY1Q9ULR0 285 aaKnown RBP9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 LHX6Q9UPM6 363 aa9.55□□□□□ -0.88
NPLOC4-211ENST00000573212 PRRC2BQ5JSZ5 2229 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 PTPDC1A2A3K4 754 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 LCHNA4D1U4 455 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 HOXA2O43364 376 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 RANBP6O60518 1105 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 SNHG28P0DPA3 235 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 TXNP10599 105 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 TOP1P11387 765 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 CALML3P27482 149 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 ERVK-21P61565 698 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 WDR5P61964 334 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 PTGISQ16647 500 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 TCTN1Q2MV58 587 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 VPS53Q5VIR6 699 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 SLC30A10Q6XR72 485 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 CAGE1Q8TC20 777 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 DHX38Q92620 1227 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 TTC14Q96N46 770 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 MAF1Q9H063 256 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 GZF1Q9H116 711 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 SUGCTQ9HAC7 445 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 PNMA2Q9UL42 364 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 WDR19Q8NEZ3 1342 aa9.54□□□□□ -0.88
NPLOC4-211ENST00000573212 NBNO60934 754 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 GJB5O95377 273 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 PARNO95453 639 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 FGAP02671 866 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 PDHBP11177 359 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 DEFB103AP81534 67 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 CCDC96Q2M329 555 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 TMCO2Q7Z6W1 182 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 FAM178BQ8IXR5 827 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 OTUD7AQ8TE49 926 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 TBC1D5Q92609 795 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 RAD9AQ99638 391 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 HCN4Q9Y3Q4 1203 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 TCF20Q9UGU0 1960 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 LRRC37A2A6NM11 1700 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 REV3LO60673 3130 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 GBF1Q92538 1859 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 SALL3Q9BXA9 1300 aa9.53□□□□□ -0.88
NPLOC4-211ENST00000573212 ABHD14A-ACY1A0A1B0GW23 586 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 LINC01553A4QN01 128 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 CKBP12277 381 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 SELPP16109 830 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 GCGRP47871 477 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 KCNJ6P48051 423 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 ARHGAP1Q07960 439 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 ZNF543Q08ER8 600 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 TRIM71Q2Q1W2 868 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 LEXMQ3ZCV2 418 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 CNKSR3Q6P9H4 555 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 PACS2Q86VP3 889 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 RDH13Q8NBN7 331 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 AFG1LQ8WV93 481 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 TAAR1Q96RJ0 339 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 TGS1Q96RS0 853 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 FSD1Q9BTV5 496 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 UBE2ZQ9H832 354 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 RCAN3Q9UKA8 241 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 USTQ9Y2C2 406 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 MYH7P12883 1935 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 MYH4Q9Y623 1939 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 FRMPD2Q68DX3 1309 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 RAD50Q92878 1312 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 SCN10AQ9Y5Y9 1956 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 TRANK1O15050 2925 aa9.52□□□□□ -0.89
NPLOC4-211ENST00000573212 PRR33A8MZF0 331 aa9.51□□□□□ -0.89
NPLOC4-211ENST00000573212 B4DLN1 442 aa9.51□□□□□ -0.89
NPLOC4-211ENST00000573212 HAS3O00219 553 aa9.51□□□□□ -0.89
NPLOC4-211ENST00000573212 MMP3P08254 477 aa9.51□□□□□ -0.89
NPLOC4-211ENST00000573212 CASTP20810 708 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms