RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 WDR35Q9P2L0 1181 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 LRP2BPQ9P2M1 347 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 MTRRQ9UBK8 725 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 HERC5Q9UII4 1024 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 USP20Q9Y2K6 914 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA9Q9Y5G4 932 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA8Q9Y5G5 932 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA7Q9Y5G6 932 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA6Q9Y5G7 932 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA3Q9Y5H0 932 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 PCDHGA2Q9Y5H1 932 aa5.74□□□□□ -1.49
TOPBP1-210ENST00000572787 A0A087X0M5 115 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 A0A1B0GX30 115 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 TCRBV16S1A1N1A0A5B0 115 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 A6NLC8 198 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 PES1O00541 588 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 MPHOSPH10O00566 681 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 GRIN3BO60391 1043 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 COBLO75128 1261 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 TBX18O95935 607 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 KRT1P04264 644 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 APOA4P06727 396 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 MYBP10242 640 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 NAT1P18440 290 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 TECP42680 631 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 PDE6CP51160 858 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 UBXN2AP68543 259 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 MRPS35P82673 323 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 MLLT1Q03111 559 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 LRRC14Q15048 493 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 SKOR2Q2VWA4 1001 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 HSP90B2PQ58FF3 399 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 RPS26P11Q5JNZ5 115 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 C6orf118Q5T5N4 469 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 FAM205BPQ63HN1 556 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 BTN2A1Q7KYR7 527 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 KRT74Q7RTS7 529 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 OVCH2Q7RTZ1 564 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 KDELC2Q7Z4H8 507 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 CARNMT1Q8N4J0 409 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 MGARPQ8TDB4 240 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 DIS3LQ8TF46 1054 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 DPF3Q92784 378 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 ATP2A3Q93084 1043 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 HPS3Q969F9 1004 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 TIGD1Q96MW7 591 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM120AQ9BXJ8 343 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 STK31Q9BXU1 1019 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 NIFKQ9BYG3 293 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 GTPBP4Q9BZE4 634 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 KIAA1683Q9H0B3 1180 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 JMJD4Q9H9V9 463 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 IL21Q9HBE4 155 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 EMC7Q9NPA0 242 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 TMPRSS4Q9NRS4 437 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 MARK1Q9P0L2 795 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 JAG2Q9Y219 1238 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 HRH3Q9Y5N1 445 aa5.73□□□□□ -1.49
TOPBP1-210ENST00000572787 ANKRD34BA5PLL1 514 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM110-MUSTN1A8MSY1 372 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF891A8MT65 544 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ADAMTS3O15072 1205 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 IRAK2O43187 625 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 USO1O60763 962 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 GAS7O60861 476 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 B3GALNT1O75752 331 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 TUSC2O75896 110 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ACRP10323 421 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 TNFSF4P23510 183 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ITPKAP23677 461 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 POLR2BP30876 1174 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 PRIM2P49643 509 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 CACNB3P54284 484 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 DCAF7P61962 342 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 DSG1Q02413 1049 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 CDC16Q13042 620 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 MOGSQ13724 837 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ZKSCAN8Q15776 578 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 PKDCCQ504Y2 493 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 METTL24Q5JXM2 366 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 UNC5DQ6UXZ4 953 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 SYDE1Q6ZW31 735 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 DDX53Q86TM3 631 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 NLRP13Q86W25 1043 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 TMTC1Q8IUR5 882 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 DZIP1LQ8IYY4 767 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF784Q8NCA9 323 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 CCDC191Q8NCU4 936 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ZSCAN18Q8TBC5 510 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 KCTD13Q8WZ19 329 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 DIO2Q92813 273 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 PTPRN2Q92932 1015 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 KIAA1191Q96A73 305 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 TMEM41AQ96HV5 264 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 SUSD3Q96L08 255 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 MTRQ99707 1265 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 KATNAL1Q9BW62 490 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 APOL5Q9BWW9 433 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 TRIM6Q9C030 488 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 RANBP17Q9H2T7 1088 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms