RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 TRMT44Q8IYL2 757 aaKnown RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 SMYD4Q8IYR2 804 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 KCTD17Q8N5Z5 321 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 ERMNQ8TAM6 284 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 SLC5A5Q92911 643 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 GJA10Q969M2 543 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 ATG4CQ96DT6 458 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 CDCA5Q96FF9 252 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 XPO4Q9C0E2 1151 aaKnown RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 MAF1Q9H063 256 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 RRAGDQ9NQL2 400 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 COL20A1Q9P218 1284 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 RWDD2AQ9UIY3 292 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 VAV3Q9UKW4 847 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 NFE2L3Q9Y4A8 694 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 CSADQ9Y600 493 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 KAT6AQ92794 2004 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 MEIS1O00470 390 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 PITPNM1O00562 1244 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 ATP2A1O14983 1001 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 MED24O75448 989 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 PSMD10O75832 226 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 SERPINC1P01008 464 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 BCRP11274 1271 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 ATP1A3P13637 1013 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 RPA1P27694 616 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 STAT3P40763 770 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 PRCPP42785 496 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 STX17P56962 302 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 UBASH3AP57075 661 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 ASIC1P78348 528 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 SETQ01105 290 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 PPATQ06203 517 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 PDE4DQ08499 809 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 PAK1Q13153 545 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 STIM1Q13586 685 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 DHX8Q14562 1220 aaKnown RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 TKFCQ3LXA3 575 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 CEP55Q53EZ4 464 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 CDKAL1Q5VV42 579 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 HAUS3Q68CZ6 603 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 NCAPH2Q6IBW4 605 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 KLHL10Q6JEL2 608 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 DLK2Q6UY11 383 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 UNC13DQ70J99 1090 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 CCDC186Q7Z3E2 898 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 ANKRD13AQ8IZ07 590 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 ADSSL1Q8N142 457 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 CYP2W1Q8TAV3 490 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 NELFBQ8WX92 580 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 UIMC1Q96RL1 719 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 MXRA8Q9BRK3 442 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 POLR3CQ9BUI4 534 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 TAF1DQ9H5J8 278 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 SAMSN1Q9NSI8 373 aaKnown RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 RNF146Q9NTX7 359 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 EXOC1Q9NV70 894 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 HOXC10Q9NYD6 342 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 IMPACTQ9P2X3 320 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 NRBP1Q9UHY1 535 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 ZNF214Q9UL59 606 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 KIAA1024Q9UPX6 916 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 GDAQ9Y2T3 454 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 UBIAD1Q9Y5Z9 338 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 DOCK3Q8IZD9 2030 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 MGAMO43451 1857 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 SIP14410 1827 aa6.87□□□□□ -1.31
TRAPPC1-204ENST00000571947 EVPLQ92817 2033 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 POTEB3A0JP26 581 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 SPDYE5A6NIY4 337 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 SPDYE16A6NNV3 312 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 POTECB2RU33 542 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 E9PMD0 336 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 CXCL11O14625 94 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 ZNF500O60304 480 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 PLA2G4BP0C869 781 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 SPATA31C1P0DKV0 1188 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 ARP10275 920 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 MUTP22033 750 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 PTGS1P23219 599 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 CLCN1P35523 988 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 RPS6P62753 249 aaKnown RBP6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 UBXN2AP68543 259 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 EHHADHQ08426 723 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 PSMD2Q13200 908 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 PPP2R5CQ13362 524 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 TMEM132BQ14DG7 1078 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 TPD52L1Q16890 204 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 CCDC144BQ3MJ40 725 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 LRCH2Q5VUJ6 765 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 PCNX4Q63HM2 1172 aa6.86□□□□□ -1.31
TRAPPC1-204ENST00000571947 SNRNP48Q6IEG0 339 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms