RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
CDRT1-206ENST00000571263 NUDT12Q9BQG2 462 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 CCSER1Q9C0I3 900 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 CSRNP2Q9H175 543 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.25
CDRT1-206ENST00000571263 LRWD1Q9UFC0 647 aa13.46□□□□□ -0.25
CDRT1-206ENST00000571263 SMCHD1A6NHR9 2005 aa13.46□□□□□ -0.26
CDRT1-206ENST00000571263 SOWAHBA6NEL2 793 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 MSH4O15457 936 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 HOXC6P09630 235 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 HSPA6P17066 643 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 ITGB5P18084 799 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 ICAM3P32942 547 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 TECP42680 631 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 UBXN2AP68543 259 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 KANK3Q6NY19 840 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 SHC4Q6S5L8 630 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 MAMDC4Q6UXC1 1216 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 ELOA2Q8IYF1 753 aaPredicted RBP13.45□□□□□ -0.26
CDRT1-206ENST00000571263 HAS1Q92839 578 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 HOOK1Q9UJC3 728 aaKnown RBP13.45□□□□□ -0.26
CDRT1-206ENST00000571263 MYH7BA7E2Y1 1941 aa13.45□□□□□ -0.26
CDRT1-206ENST00000571263 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
CDRT1-206ENST00000571263 TNPO2O14787 897 aaKnown RBP13.44□□□□□ -0.26
CDRT1-206ENST00000571263 CTAGE5O15320 804 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 GAS7O60861 476 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
CDRT1-206ENST00000571263 GNRH1P01148 92 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 PGK2P07205 417 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 MUTP22033 750 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 HOXD10P28358 340 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 RGS2P41220 211 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 SYKP43405 635 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 SP3Q02447 781 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
CDRT1-206ENST00000571263 MAP2K5Q13163 448 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 MORN1Q5T089 497 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 LRCH2Q5VUJ6 765 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 HAUS3Q68CZ6 603 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 CALML4Q96GE6 196 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 CLIC6Q96NY7 704 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 CUEDC2Q9H467 287 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 AGO4Q9HCK5 861 aaKnown RBP13.44□□□□□ -0.26
CDRT1-206ENST00000571263 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 HPSEQ9Y251 543 aa13.44□□□□□ -0.26
CDRT1-206ENST00000571263 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 NFASCO94856 1347 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 SYNGAP1Q96PV0 1343 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 SPATA31C2B4DYI2 1134 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 PSMD10O75832 226 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 ARP10275 920 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 SFNP31947 248 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 LACTBP83111 547 aaPredicted RBP13.43□□□□□ -0.26
CDRT1-206ENST00000571263 PPP2R5CQ13362 524 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 NEDD9Q14511 834 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 IL17AQ16552 155 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 OTOP1Q7RTM1 612 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
CDRT1-206ENST00000571263 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 ENGASEQ8NFI3 743 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 CYP2W1Q8TAV3 490 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 SYMPKQ92797 1274 aaKnown RBP13.43□□□□□ -0.26
CDRT1-206ENST00000571263 PURBQ96QR8 312 aaKnown RBP13.43□□□□□ -0.26
CDRT1-206ENST00000571263 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 BEGAINQ9BUH8 593 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 VTA1Q9NP79 307 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 MRVI1Q9Y6F6 885 aa13.43□□□□□ -0.26
CDRT1-206ENST00000571263 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 DKC1O60832 514 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDRT1-206ENST00000571263 COBLO75128 1261 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 TRPA1O75762 1119 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 ZNF202O95125 648 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 XRCC5P13010 732 aaKnown RBP13.42□□□□□ -0.26
CDRT1-206ENST00000571263 PFKFB1P16118 471 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 KRT76Q01546 638 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 CABP7Q86V35 215 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 FMR1NBQ8N0W7 255 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-206ENST00000571263 RASSF8Q8NHQ8 419 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 NEK9Q8TD19 979 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 USP6NLQ92738 828 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 MAML3Q96JK9 1138 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 LRRC27Q9C0I9 530 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 MAGEF1Q9HAY2 307 aa13.42□□□□□ -0.26
CDRT1-206ENST00000571263 PSMC4P43686 418 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms