RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	NR5A1	Q13285	461 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MTMR1	Q13613	665 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	LRRC41	Q15345	812 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SAFB	Q15424	915 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	RNF180	Q86T96	592 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DIS3L2	Q8IYB7	885 aa	Known RBP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	OR6J1	Q8NGC5	347 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	TBCK	Q8TEA7	893 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DIS3L	Q8TF46	1054 aa	Known RBP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CRYGN	Q8WXF5	182 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GPRASP2	Q96D09	838 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MXRA8	Q9BRK3	442 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SPC25	Q9HBM1	224 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DDX41	Q9UJV9	622 aa	Known RBP	13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845		Q9Y3F1	56 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	UBIAD1	Q9Y5Z9	338 aa		13.18	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MYADML2	A6NDP7	307 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	BTBD18	B2RXH4	712 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SPATA31C2	B4DYI2	1134 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DNM1L	O00429	736 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SORBS3	O60504	671 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GH1	P01241	217 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CYP3A4	P08684	503 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	TGFB3	P10600	412 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	UBA1	P22314	1058 aa	Known RBP	13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ICAM3	P32942	547 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	IRX5	P78411	483 aa	Predicted RBP	13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	BEX3	Q00994	111 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SEMA3F	Q13275	785 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	INF2	Q27J81	1249 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PIK3AP1	Q6ZUJ8	805 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FBXO18	Q8NFZ0	1043 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CDHR1	Q96JP9	859 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	JADE2	Q9NQC1	790 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FOXD4L1	Q9NU39	408 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MYH11	P35749	1972 aa		13.17	□□□□□ -0.3
ATP2A3-208	ENST00000570845	LTBP2	Q14767	1821 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FAM205C	A6NFA0	338 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GGPS1	O95749	300 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CST5	P28325	142 aa	Predicted RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MNX1	P50219	401 aa	Predicted RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SP2	Q02086	613 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	ARHGAP1	Q07960	439 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GNL2	Q13823	731 aa	Known RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FSCN1	Q16658	493 aa	Known RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CEP55	Q53EZ4	464 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	GNAS	Q5JWF2	1037 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	DHX37	Q8IY37	1157 aa	Known RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KLHDC9	Q8NEP7	349 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CYP2W1	Q8TAV3	490 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	TNFRSF25	Q93038	417 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	INTS4	Q96HW7	963 aa	Known RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PAWR	Q96IZ0	340 aa	Known RBP	13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PKD2L1	Q9P0L9	805 aa		13.16	□□□□□ -0.3
ATP2A3-208	ENST00000570845	TANC1	Q9C0D5	1861 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	IGLV3-22	A0A075B6J6	115 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FAM86B1	E9PN63	330 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845		H3BQV1	296 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MEIS1	O00470	390 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CTAGE5	O15320	804 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	HSP90AA1	P07900	732 aa	Known RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	FAM86B2	P0C5J1	330 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	AR	P10275	920 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CIITA	P33076	1130 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CPT1A	P50416	773 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	USP11	P51784	963 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NKX3-2	P78367	333 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SET	Q01105	290 aa	Predicted RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KCNA10	Q16322	511 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	EARS2	Q5JPH6	523 aa	Known RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CELF3	Q5SZQ8	465 aa	Known RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	IFFO2	Q5TF58	517 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	LARP1B	Q659C4	914 aa	Known RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NIPA1	Q7RTP0	329 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NECAB2	Q7Z6G3	386 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	NEK8	Q86SG6	692 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PLA2G4D	Q86XP0	818 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	PCSK9	Q8NBP7	692 aa	Known RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	TSEN34	Q9BSV6	310 aa	Known RBP	13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	C11orf49	Q9H6J7	331 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	KCNH7	Q9NS40	1196 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	CEP290	O15078	2479 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	SCN5A	Q14524	2016 aa		13.15	□□□□□ -0.3
ATP2A3-208	ENST00000570845	MAFG	O15525	162 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	EDIL3	O43854	480 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ZEB2	O60315	1214 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ATP9A	O75110	1047 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	TDP2	O95551	362 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ASGR1	P07306	291 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	KCNA2	P16389	499 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ACLY	P53396	1101 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	LAMC2	Q13753	1193 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	NEDD9	Q14511	834 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	LETM2	Q2VYF4	491 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PRR16	Q569H4	304 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	BRDT	Q58F21	947 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MYSM1	Q5VVJ2	828 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CYFIP1	Q7L576	1253 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	UBE2Q1	Q7Z7E8	422 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms