RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 INPP4AQ96PE3 977 aaPredicted RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 ALG1Q9BT22 464 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 PSTPIP2Q9H939 334 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 IL23AQ9NPF7 189 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 RBM28Q9NW13 759 aaKnown RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 RTEL1Q9NZ71 1219 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 NAP1L2Q9ULW6 460 aaPredicted RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 TELO2Q9Y4R8 837 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 V9GY48 417 aaPredicted RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 GRXCR1A8MXD5 290 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 SPATA31C2B4DYI2 1134 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 STXBP3O00186 592 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 ADAMTS3O15072 1205 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 FIBPO43427 364 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 REC8O95072 547 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 F2P00734 622 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 SUPT20HL2P0C7V6 817 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 TGFB3P10600 412 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 CASTP20810 708 aaKnown RBP6.22□□□□□ -1.41
CHD3-212ENST00000570758 SMAD3P84022 425 aaKnown RBP6.22□□□□□ -1.41
CHD3-212ENST00000570758 ZNF200P98182 395 aaPredicted RBP6.22□□□□□ -1.41
CHD3-212ENST00000570758 PTPN11Q06124 597 aaPredicted RBP6.22□□□□□ -1.41
CHD3-212ENST00000570758 HIC1Q14526 733 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 MFSD10Q14728 455 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 PCNX4Q63HM2 1172 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 XRRA1Q6P2D8 792 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 SESTD1Q86VW0 696 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 HERVK_113Q902F9 699 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 BRF1Q92994 677 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 CUL5Q93034 780 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 PGBD1Q96JS3 809 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 FAM161BQ96MY7 647 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 GUCD1Q96NT3 240 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 USP26Q9BXU7 913 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 AGXT2Q9BYV1 514 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 CXXC1Q9P0U4 656 aaPredicted RBP6.22□□□□□ -1.41
CHD3-212ENST00000570758 HDAC6Q9UBN7 1215 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 PCDHA6Q9UN73 950 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
CHD3-212ENST00000570758 RANBP2P49792 3224 aaKnown RBP6.22□□□□□ -1.41
CHD3-212ENST00000570758 MYH7BA7E2Y1 1941 aa6.21□□□□□ -1.41
CHD3-212ENST00000570758 NID2Q14112 1375 aa6.21□□□□□ -1.41
CHD3-212ENST00000570758 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 ATP9AO75110 1047 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 PPFIA4O75335 1185 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 STAM2O75886 525 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 FGBP02675 491 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 LGALS2P05162 132 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 IQCF3P0C7M6 154 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 KCNA2P16389 499 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 ITGB5P18084 799 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 PBX2P40425 430 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 METAP2P50579 478 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHD3-212ENST00000570758 ADCY7P51828 1080 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 RCAN1P53805 252 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 NAPAP54920 295 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 FGD1P98174 961 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 TOB2Q14106 344 aaPredicted RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 GPNMBQ14956 572 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 PKN1Q16512 942 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 PTGISQ16647 500 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 KIAA0753Q2KHM9 967 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 TRIM71Q2Q1W2 868 aaKnown RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 GNPTABQ3T906 1256 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 ERICH6BQ5W0A0 696 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 PPP1R18Q6NYC8 613 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 PSRC1Q6PGN9 363 aaPredicted RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 METTL7BQ6UX53 244 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 CYFIP1Q7L576 1253 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 OTOP2Q7RTS6 562 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 DEFB128Q7Z7B8 93 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 NLRX1Q86UT6 975 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 TRIM50Q86XT4 487 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 FBXL16Q8N461 479 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 WNT8BQ93098 351 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 GPR20Q99678 358 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 LARP6Q9BRS8 491 aaKnown RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 C16orf70Q9BSU1 422 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 TTYH1Q9H313 450 aaPredicted RBP6.21□□□□□ -1.42
CHD3-212ENST00000570758 SEMA6BQ9H3T3 888 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 MLXIPQ9HAP2 919 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 ZSWIM6Q9HCJ5 1215 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 RIC8AQ9NPQ8 531 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 TMEM260Q9NX78 707 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 BARHL2Q9NY43 387 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 GTF2IRD1Q9UHL9 959 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 UBIAD1Q9Y5Z9 338 aa6.21□□□□□ -1.42
CHD3-212ENST00000570758 DNAH12Q6ZR08 3092 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 SCN5AQ14524 2016 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 DOCK5Q9H7D0 1870 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 SMCO2A6NFE2 343 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 SPDYE3A6NKU9 549 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PITPNM1O00562 1244 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PRPF3O43395 683 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 EPB41L2O43491 1005 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 SMIM10L2AP0DMW4 78 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 SMIM10L2BP0DMW5 78 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms