RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MAMDC2Q7Z304 686 aaPredicted RBP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 TRIM59Q8IWR1 403 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 MRPL41Q8IXM3 137 aaKnown RBP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 CCDC144CPQ8IYA2 1237 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 PJA1Q8NG27 643 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 PPM1EQ8WY54 764 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 KCTD13Q8WZ19 329 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 GTPBP3Q969Y2 492 aaKnown RBP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 E2F7Q96AV8 911 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF837Q96EG3 531 aaPredicted RBP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 WNK4Q96J92 1243 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF512BQ96KM6 892 aaPredicted RBP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 CCDC140Q96MF4 163 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 SARGQ9BW04 601 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 SLC13A1Q9BZW2 595 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 CRTAC1Q9NQ79 661 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 WHRNQ9P202 907 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 INTUQ9ULD6 942 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 HIF3AQ9Y2N7 669 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 LUC7L2Q9Y383 392 aaKnown RBP3.99□□□□□ -1.77
CNOT1-221ENST00000569924 EMC9Q9Y3B6 208 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 CSADQ9Y600 493 aa3.99□□□□□ -1.77
CNOT1-221ENST00000569924 UBR3Q6ZT12 1888 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 C4BP0C0L5 1744 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 TOGARAM1Q9Y4F4 1720 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 SYNGAP1Q96PV0 1343 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 MAP2P11137 1827 aaKnown RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ITGB4P16144 1822 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 KIF20BQ96Q89 1820 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ADARB2-AS1A8MUL3 147 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CYP27B1O15528 508 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 NRDCO43847 1150 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CT47B1P0C2W7 299 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 NBPF7P0C2Y1 421 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 HSPA6P17066 643 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CD247P20963 164 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CCND1P24385 295 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CDC25BP30305 580 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ADH7P40394 386 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 HTR3AP46098 478 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PCBP4P57723 403 aaKnown RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 TMF1P82094 1093 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 MAP4K2Q12851 820 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PICALMQ13492 652 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 RAPGEF1Q13905 1077 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 SART3Q15020 963 aaKnown RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 HP1BP3Q5SSJ5 553 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ZBTB37Q5TC79 503 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PIK3R6Q5UE93 754 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 DCAF15Q66K64 600 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 IL31Q6EBC2 164 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ZCCHC8Q6NZY4 707 aaKnown RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CLEC4GQ6UXB4 293 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 HID1Q8IV36 788 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 TPH2Q8IWU9 490 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 SPICE1Q8N0Z3 855 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CBARPQ8N350 705 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 NME8Q8N427 588 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ARHGEF39Q8N4T4 335 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CRACR2BQ8N4Y2 399 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 IL22RA1Q8N6P7 574 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 USHBP1Q8N6Y0 703 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PIGBQ92521 554 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 FUBP3Q96I24 572 aaKnown RBP eCLIP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 NAP1L4Q99733 375 aaKnown RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 USP25Q9UHP3 1055 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 TAGLN3Q9UI15 199 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 GDF2Q9UK05 429 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PNMA8BQ9ULN7 279 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 AKT3Q9Y243 479 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ANKRD6Q9Y2G4 727 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF451Q9Y4E5 1061 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PCDHGC5Q9Y5F6 944 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 CICQ96RK0 1608 aaPredicted RBP3.98□□□□□ -1.77
CNOT1-221ENST00000569924 PLEKHG2Q9H7P9 1386 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 ANKRD26Q9UPS8 1709 aa3.98□□□□□ -1.77
CNOT1-221ENST00000569924 IGSF1Q8N6C5 1336 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 ZNF831Q5JPB2 1677 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 A0A087WZG4 1122 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 ANO9A1A5B4 782 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 BLACEA4D250 179 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 M0R2C6 588 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 C2CD2LO14523 706 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 FSCN2O14926 492 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 RGS9O75916 674 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-221ENST00000569924 PRKD3O94806 890 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 SNUPNO95149 360 aaKnown RBP3.97□□□□□ -1.77
CNOT1-221ENST00000569924 CRTAMO95727 393 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 APPP05067 770 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 PHKG2P15735 406 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 HOXC12P31275 282 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 CYP2C19P33261 490 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 SMCPP49901 116 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-221ENST00000569924 NEK3P51956 506 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 GFRA1P56159 465 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 IRX6P78412 446 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-221ENST00000569924 POU5F1BQ06416 359 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 GTF2H3Q13889 308 aa3.97□□□□□ -1.77
CNOT1-221ENST00000569924 NTRK3Q16288 839 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms