RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ABCF2Q9UG63 623 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 SYCE1LA8MT33 242 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PFDN6O15212 129 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 MX2P20592 715 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 NSFP46459 744 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PLA2G4AP47712 749 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 IFNAR2P48551 515 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 HAND2P61296 217 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 MRPS15P82914 257 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 LDHAL6AQ6ZMR3 332 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 RSAD2Q8WXG1 361 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 ITFG2Q969R8 447 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 NAF1Q96HR8 494 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 RAB21Q9UL25 225 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 COMMD3-BMI1R4GMX3 469 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 NESP48681 1621 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 SMIM31A0A1B0GVY4 71 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 WASLO00401 505 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PARP1P09874 1014 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 TPP2P29144 1249 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CCZ1BP86790 482 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CCZ1P86791 482 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 GSTA3Q16772 222 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 P2RX5Q93086 422 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 TRIM56Q9BRZ2 755 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 LSM14BQ9BX40 385 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 ANAPC5Q9UJX4 755 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PNMA2Q9UL42 364 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PCDHA13Q9Y5I0 950 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 RSPH10B2B2RC85 870 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 XPO1O14980 1071 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 FKBP6O75344 327 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 RSPH10BP0C881 870 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 GPTP24298 496 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 RGS2P41220 211 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 FKBP3Q00688 224 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 TFAP4Q01664 338 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 EHHADHQ08426 723 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PSMD6Q15008 389 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 WAPLQ7Z5K2 1190 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 NEK8Q86SG6 692 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CABP7Q86V35 215 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 TCEANC2Q96MN5 208 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 DPH5Q9H2P9 285 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 SLC4A4Q9Y6R1 1079 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 ADGRL3Q9HAR2 1447 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 LGALS16A8MUM7 142 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 RAP1GDS1P52306 607 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 IGBP1P78318 339 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 C1orf146Q5VVC0 180 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 BRIP1Q9BX63 1249 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 NHEJ1Q9H9Q4 299 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 TMOD4Q9NZQ9 345 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 L1RE1Q9UN81 338 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ADGRA3Q8IWK6 1321 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SLC9C2Q5TAH2 1124 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 NAA35Q5VZE5 725 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 FBXW10Q5XX13 1052 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 PKD2L2Q9NZM6 624 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 AIPL1Q9NZN9 384 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 MTO1Q9Y2Z2 717 aaKnown RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ABCA5Q8WWZ7 1642 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 CA4P22748 312 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 MMEL1Q495T6 779 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 BEND6Q5SZJ8 279 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 NAIF1Q69YI7 327 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 NCAPH2Q6IBW4 605 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 CD209Q9NNX6 404 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 FLT4P35916 1363 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 RPAP1Q9BWH6 1393 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SAMD9Q5K651 1589 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 GNAT1P11488 350 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ARFIP2P53365 341 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SKOR1P84550 965 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ATP2B2Q01814 1243 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 RASSF3Q86WH2 238 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 OR9Q1Q8NGQ5 310 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 RNF26Q9BY78 433 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 CARD9Q9H257 536 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 DMAP1Q9NPF5 467 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ATAD3AQ9NVI7 634 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 DNAJC17Q9NVM6 304 aaKnown RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 C15orf41Q9Y2V0 281 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 EXOC1LA0A1B0GW35 172 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SLC26A4O43511 780 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 KRT38O76015 456 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 DDAH1O94760 285 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 SASH1O94885 1247 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 CWF19L2Q2TBE0 894 aaKnown RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 LRRC31Q6UY01 552 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 ATL2Q8NHH9 583 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 DTX3LQ8TDB6 740 aa7.67□□□□□ -1.18
CNOT1-216ENST00000569240 U2AF1L4Q8WU68 220 aaKnown RBP7.67□□□□□ -1.18
CNOT1-216ENST00000569240 EPS8L2Q9H6S3 715 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms