RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RTP1P59025 263 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 ARHGAP4P98171 946 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 MTMR1Q13613 665 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 MCTP2Q6DN12 878 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 CCDC62Q6P9F0 684 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 SLC39A5Q6ZMH5 540 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 TEX2Q8IWB9 1127 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 BLIDQ8IZY5 108 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 FAM184AQ8NB25 1140 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 AFG1LQ8WV93 481 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 SPATA33Q96N06 139 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 INPP4AQ96PE3 977 aaPredicted RBP14.62□□□□□ -0.07
CDT1-203ENST00000569140 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
CDT1-203ENST00000569140 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
CDT1-203ENST00000569140 CTAGE5O15320 804 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 CD2BP2O95400 341 aaKnown RBP14.61□□□□□ -0.07
CDT1-203ENST00000569140 SREBF1P36956 1147 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 PSMC6P62333 389 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 ARHGAP1Q07960 439 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 LAMC2Q13753 1193 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 TRIM60Q495X7 471 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 CCSAPQ6IQ19 270 aaPredicted RBP14.61□□□□□ -0.07
CDT1-203ENST00000569140 GPRASP2Q96D09 838 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 CDHR1Q96JP9 859 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 BRMS1Q9HCU9 246 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 PRDM5Q9NQX1 630 aaPredicted RBP14.61□□□□□ -0.07
CDT1-203ENST00000569140 POLR3EQ9NVU0 708 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 NR2E3Q9Y5X4 410 aa14.61□□□□□ -0.07
CDT1-203ENST00000569140 A0A0U1RQG5 324 aaPredicted RBP14.6□□□□□ -0.07
CDT1-203ENST00000569140 CCDC194A0A1B0GVG4 234 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 SPATA31C2B4DYI2 1134 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 PQBP1O60828 265 aaKnown RBP14.6□□□□□ -0.07
CDT1-203ENST00000569140 MMP3P08254 477 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 TGFB3P10600 412 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 FDPSP14324 419 aaKnown RBP14.6□□□□□ -0.07
CDT1-203ENST00000569140 ITGB5P18084 799 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 MCM2P49736 904 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 SP2Q02086 613 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 NEDD9Q14511 834 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 CELF3Q5SZQ8 465 aaKnown RBP14.6□□□□□ -0.07
CDT1-203ENST00000569140 GALNT17Q6IS24 598 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 UIMC1Q96RL1 719 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 MXRA8Q9BRK3 442 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 LLPHQ9BRT6 129 aaKnown RBP14.6□□□□□ -0.07
CDT1-203ENST00000569140 PHF20Q9BVI0 1012 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 ZMYND8Q9ULU4 1186 aaPredicted RBP14.6□□□□□ -0.07
CDT1-203ENST00000569140 UBIAD1Q9Y5Z9 338 aa14.6□□□□□ -0.07
CDT1-203ENST00000569140 ALPK3Q96L96 1907 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 CABYRO75952 493 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 SYN1P17600 705 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 ICAM3P32942 547 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 KRT2P35908 639 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 NKX3-2P78367 333 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
CDT1-203ENST00000569140 GUCY1B3Q02153 619 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 SEMA3FQ13275 785 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 NONOQ15233 471 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDT1-203ENST00000569140 DGKDQ16760 1214 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 FAM47CQ5HY64 1035 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 PLA2G4DQ86XP0 818 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 DAGLBQ8NCG7 672 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 IL27Q8NEV9 243 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 PPTC7Q8NI37 304 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 CYP2W1Q8TAV3 490 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 TMX3Q96JJ7 454 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 MTG1Q9BT17 334 aaPredicted RBP14.59□□□□□ -0.07
CDT1-203ENST00000569140 JADE2Q9NQC1 790 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 PRKAG2Q9UGJ0 569 aa14.59□□□□□ -0.07
CDT1-203ENST00000569140 A6NJR5 290 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 DDX39AO00148 427 aaKnown RBP14.58□□□□□ -0.08
CDT1-203ENST00000569140 KPNA6O60684 536 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 ZNF286BP0CG31 522 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 PURAQ00577 322 aaKnown RBP14.58□□□□□ -0.08
CDT1-203ENST00000569140 ITGA7Q13683 1181 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 CEP55Q53EZ4 464 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 PRR16Q569H4 304 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 MYSM1Q5VVJ2 828 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 KRT25Q7Z3Z0 450 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 FAM177A1Q8N128 213 aaPredicted RBP14.58□□□□□ -0.08
CDT1-203ENST00000569140 GIMAP8Q8ND71 665 aaPredicted RBP14.58□□□□□ -0.08
CDT1-203ENST00000569140 TBCKQ8TEA7 893 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 PPP1R13LQ8WUF5 828 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 C8orf76Q96K31 380 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 SDF4Q9BRK5 362 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 BCAS3Q9H6U6 928 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 ELP1O95163 1332 aa14.58□□□□□ -0.08
CDT1-203ENST00000569140 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 MYH7BA7E2Y1 1941 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 H0YGN5 161 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 ATP9AO75110 1047 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 ARP10275 920 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 SETQ01105 290 aaPredicted RBP14.57□□□□□ -0.08
CDT1-203ENST00000569140 TLE2Q04725 743 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
CDT1-203ENST00000569140 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDT1-203ENST00000569140 INF2Q27J81 1249 aa14.57□□□□□ -0.08
CDT1-203ENST00000569140 HSDL1Q3SXM5 330 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms