RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 HDAC6Q9UBN7 1215 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-223ENST00000568301 HAS3O00219 553 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 ZBTB5O15062 677 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 F2P00734 622 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 CXCL10P02778 98 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 PSEN2P49810 448 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 DHX37Q8IY37 1157 aaKnown RBP17.49■□□□□ 0.39
COMMD4-223ENST00000568301 ZBED2Q9BTP6 218 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 MAD2L2Q9UI95 211 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 PCDHA1Q9Y5I3 950 aa17.49■□□□□ 0.39
COMMD4-223ENST00000568301 BAZ2BQ9UIF8 2168 aaKnown RBP17.48■□□□□ 0.39
COMMD4-223ENST00000568301 PPP1R11O60927 126 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-223ENST00000568301 NBNO60934 754 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 TGFB3P10600 412 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 CKBP12277 381 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 HOXD8P13378 290 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-223ENST00000568301 TMEM31Q5JXX7 168 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 MYSM1Q5VVJ2 828 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 EXOC6Q8TAG9 804 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 PDCD2LQ9BRP1 358 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 CD320Q9NPF0 282 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 C11orf16Q9NQ32 467 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 MTUS1Q9ULD2 1270 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 HCN4Q9Y3Q4 1203 aa17.48■□□□□ 0.39
COMMD4-223ENST00000568301 ABHD14A-ACY1A0A1B0GW23 586 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 RGS20O76081 388 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 TRDNQ13061 729 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 PTK7Q13308 1070 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 MFSD10Q14728 455 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 KIAA0753Q2KHM9 967 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 CELF3Q5SZQ8 465 aaKnown RBP17.47■□□□□ 0.39
COMMD4-223ENST00000568301 CNKSR3Q6P9H4 555 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 CYB5R4Q7L1T6 521 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 ALG1Q9BT22 464 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 LMCD1Q9NZU5 365 aa17.47■□□□□ 0.39
COMMD4-223ENST00000568301 ARIH1Q9Y4X5 557 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-223ENST00000568301 WDFY4Q6ZS81 3184 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 FAM86C2PA6NEL3 165 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 GPR37L1O60883 481 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 EFCAB14O75071 495 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 GJB5O95377 273 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 MYCLP12524 364 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-223ENST00000568301 PGM5Q15124 567 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 RAD9AQ99638 391 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 IL25Q9H293 177 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 RIOX1Q9H6W3 641 aa17.46■□□□□ 0.39
COMMD4-223ENST00000568301 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-223ENST00000568301 LINC01553A4QN01 128 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-223ENST00000568301 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 ZNF286BP0CG31 522 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 HOXA13P31271 388 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-223ENST00000568301 ERVK-21P61565 698 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 IKBKEQ14164 716 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 GRM4Q14833 912 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
COMMD4-223ENST00000568301 HSDL1Q3SXM5 330 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 FAM117BQ6P1L5 589 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 SPATA33Q96N06 139 aa17.45■□□□□ 0.38
COMMD4-223ENST00000568301 TGS1Q96RS0 853 aaKnown RBP17.45■□□□□ 0.38
COMMD4-223ENST00000568301 C5orf42Q9H799 3197 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 GGPS1O95749 300 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 SP2Q02086 613 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 SLC35G1Q2M3R5 365 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 TRAF7Q6Q0C0 670 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 RUFY2Q8WXA3 655 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 WNT8BQ93098 351 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 PIGSQ96S52 555 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 UBE2ZQ9H832 354 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-223ENST00000568301 SIP14410 1827 aa17.44■□□□□ 0.38
COMMD4-223ENST00000568301 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-223ENST00000568301 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 ERICH2A1L162 156 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 PI4K2BG5E9Z4 385 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 IFIT3O14879 490 aaKnown RBP17.43■□□□□ 0.38
COMMD4-223ENST00000568301 CYP21A2P08686 494 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 CCND2P30279 289 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 ZNF200P98182 395 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-223ENST00000568301 TROAPQ12815 778 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 MBTPS1Q14703 1052 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 IL31RAQ8NI17 732 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 C16orf70Q9BSU1 422 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 MLXIPQ9HAP2 919 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 TRIOO75962 3097 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 EMSYQ7Z589 1322 aa17.43■□□□□ 0.38
COMMD4-223ENST00000568301 CYTH3O43739 400 aa17.42■□□□□ 0.38
COMMD4-223ENST00000568301 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
COMMD4-223ENST00000568301 UBA1P22314 1058 aaKnown RBP17.42■□□□□ 0.38
COMMD4-223ENST00000568301 HIC1Q14526 733 aa17.42■□□□□ 0.38
COMMD4-223ENST00000568301 SART3Q15020 963 aaKnown RBP17.42■□□□□ 0.38
COMMD4-223ENST00000568301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD4-223ENST00000568301 SERINC5Q86VE9 423 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms