RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 H0YGN5 161 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 M0R2N6 131 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 EDIL3O43854 480 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 EVI5O60447 810 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 JAK2O60674 1132 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 ELP1O95163 1332 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 FOSP01100 380 aaPredicted RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 GH1P01241 217 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 MMP3P08254 477 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 HOXD8P13378 290 aaPredicted RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 CPT1AP50416 773 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 PURAQ00577 322 aaKnown RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 JAKMIP3Q5VZ66 844 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 CXCL17Q6UXB2 119 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 RASGRP4Q8TDF6 673 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 AFG1LQ8WV93 481 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
CLK3-220ENST00000567992 C6orf50Q9HD87 102 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 STARD7Q9NQZ5 370 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
CLK3-220ENST00000567992 FIBPO43427 364 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 ATP9AO75110 1047 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 GGPS1O95749 300 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 TGFB3P10600 412 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 KCNA2P16389 499 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 GNA11P29992 359 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 CDK7P50613 346 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 GNPTABQ3T906 1256 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.61
CLK3-220ENST00000567992 KCNV1Q6PIU1 500 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 FAM177A1Q8N128 213 aaPredicted RBP11.21□□□□□ -0.61
CLK3-220ENST00000567992 SLC43A3Q8NBI5 491 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 CYP2W1Q8TAV3 490 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 GPRASP2Q96D09 838 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 GLT1D1Q96MS3 346 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
CLK3-220ENST00000567992 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 TELO2Q9Y4R8 837 aa11.21□□□□□ -0.61
CLK3-220ENST00000567992 IGLV3-22A0A075B6J6 115 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 A0A0U1RQG5 324 aaPredicted RBP11.2□□□□□ -0.62
CLK3-220ENST00000567992 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 SORBS3O60504 671 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 CABYRO75952 493 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 CYP3A4P08684 503 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 FAM86B2P0C5J1 330 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 PSMC6P62333 389 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 ARHGAP4P98171 946 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 TLE2Q04725 743 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 LAMC2Q13753 1193 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 HSDL1Q3SXM5 330 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 ANKRD33Q7Z3H0 272 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 BICD2Q8TD16 824 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 KAT2BQ92831 832 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 SENP7Q9BQF6 1050 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 MXRA8Q9BRK3 442 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 EHMT1Q9H9B1 1298 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 JADE2Q9NQC1 790 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 PDLIM7Q9NR12 457 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 KCNJ14Q9UNX9 436 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 ATP11BQ9Y2G3 1177 aa11.2□□□□□ -0.62
CLK3-220ENST00000567992 LAMA3Q16787 3333 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 ARVCFO00192 962 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 MEIS1O00470 390 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 ZEB2O60315 1214 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 PQBP1O60828 265 aaKnown RBP11.19□□□□□ -0.62
CLK3-220ENST00000567992 MYL3P08590 195 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 NLRP5P59047 1200 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 MTMR1Q13613 665 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 CEP55Q53EZ4 464 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 METTL7BQ6UX53 244 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 NLRX1Q86UT6 975 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 FAM126BQ8IXS8 530 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
CLK3-220ENST00000567992 BLIDQ8IZY5 108 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 LENG9Q96B70 501 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
CLK3-220ENST00000567992 TOX2Q96NM4 488 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 MTG1Q9BT17 334 aaPredicted RBP11.19□□□□□ -0.62
CLK3-220ENST00000567992 ALG1Q9BT22 464 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
CLK3-220ENST00000567992 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 ZMYND8Q9ULU4 1186 aaPredicted RBP11.19□□□□□ -0.62
CLK3-220ENST00000567992 NR2E3Q9Y5X4 410 aa11.19□□□□□ -0.62
CLK3-220ENST00000567992 LAMA2P24043 3122 aaKnown RBP11.18□□□□□ -0.62
CLK3-220ENST00000567992 ST18O60284 1047 aa11.18□□□□□ -0.62
CLK3-220ENST00000567992 KPNA6O60684 536 aa11.18□□□□□ -0.62
CLK3-220ENST00000567992 F2P00734 622 aa11.18□□□□□ -0.62
CLK3-220ENST00000567992 CD4P01730 458 aa11.18□□□□□ -0.62
CLK3-220ENST00000567992 ZNF286BP0CG31 522 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms