RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 DHX37Q8IY37 1157 aaKnown RBP28.94■■■□□ 2.22
FANCA-228ENST00000567943 PPTC7Q8NI37 304 aa28.94■■■□□ 2.22
FANCA-228ENST00000567943 CUL5Q93034 780 aa28.94■■■□□ 2.22
FANCA-228ENST00000567943 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.94■■■□□ 2.22
FANCA-228ENST00000567943 V9GY48 417 aaPredicted RBP28.94■■■□□ 2.22
FANCA-228ENST00000567943 CCDC196A0A1B0GTZ2 297 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 TGFB3P10600 412 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 CYP2C9P11712 490 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 UBE2SQ16763 222 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 HSDL1Q3SXM5 330 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 VWCEQ96DN2 955 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 RTEL1Q9NZ71 1219 aa28.93■■■□□ 2.22
FANCA-228ENST00000567943 GGPS1O95749 300 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 ICAM3P32942 547 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 TOB2Q14106 344 aaPredicted RBP28.92■■■□□ 2.22
FANCA-228ENST00000567943 DGKDQ16760 1214 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 FAM47CQ5HY64 1035 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 TMEM240Q5SV17 173 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 PCNX4Q63HM2 1172 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 TMEM199Q8N511 208 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 CTAGE1Q96RT6 745 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 SCN5AQ14524 2016 aa28.92■■■□□ 2.22
FANCA-228ENST00000567943 SPATA31C2B4DYI2 1134 aa28.91■■■□□ 2.22
FANCA-228ENST00000567943 STAM2O75886 525 aa28.91■■■□□ 2.22
FANCA-228ENST00000567943 ACRP10323 421 aa28.91■■■□□ 2.22
FANCA-228ENST00000567943 PPIGQ13427 754 aaKnown RBP eCLIP28.91■■■□□ 2.223e-16■■■■■ 30
FANCA-228ENST00000567943 DEFB123Q8N688 67 aa28.91■■■□□ 2.22
FANCA-228ENST00000567943 RNPC3Q96LT9 517 aaKnown RBP28.91■■■□□ 2.22
FANCA-228ENST00000567943 TRIP12Q14669 1992 aaPredicted RBP28.91■■■□□ 2.22
FANCA-228ENST00000567943 NID2Q14112 1375 aa28.9■■■□□ 2.22
FANCA-228ENST00000567943 EIF5BO60841 1220 aaKnown RBP28.9■■■□□ 2.22
FANCA-228ENST00000567943 ZNF286BP0CG31 522 aa28.9■■■□□ 2.22
FANCA-228ENST00000567943 CCL23P55773 120 aa28.9■■■□□ 2.22
FANCA-228ENST00000567943 EVCP57679 992 aa28.9■■■□□ 2.22
FANCA-228ENST00000567943 PTPN11Q06124 597 aaPredicted RBP28.9■■■□□ 2.22
FANCA-228ENST00000567943 SPATA33Q96N06 139 aa28.9■■■□□ 2.22
FANCA-228ENST00000567943 HAS3O00219 553 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 F2P00734 622 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 SUPT20HL2P0C7V6 817 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 PDIA3P30101 505 aaKnown RBP28.89■■■□□ 2.22
FANCA-228ENST00000567943 CHMP4BP1P59074 171 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 RASIP1Q5U651 963 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 SESTD1Q86VW0 696 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 PDRG1Q9NUG6 133 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 TELO2Q9Y4R8 837 aa28.89■■■□□ 2.22
FANCA-228ENST00000567943 STXBP3O00186 592 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 PPFIA4O75335 1185 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 SEC24BO95487 1268 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 NAPAP54920 295 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 ANAPC15P60006 121 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 CCT2P78371 535 aaKnown RBP28.88■■■□□ 2.21
FANCA-228ENST00000567943 GNPTABQ3T906 1256 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 XRRA1Q6P2D8 792 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 ZNF365Q70YC5 407 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 LARP6Q9BRS8 491 aaKnown RBP28.88■■■□□ 2.21
FANCA-228ENST00000567943 IL23AQ9NPF7 189 aa28.88■■■□□ 2.21
FANCA-228ENST00000567943 PSEN2P49810 448 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 GDF6Q6KF10 455 aaPredicted RBP28.87■■■□□ 2.21
FANCA-228ENST00000567943 SCLYQ96I15 445 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 MTMR10Q9NXD2 777 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 PCDHA6Q9UN73 950 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 PCDHA8Q9Y5H6 950 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 EYSQ5T1H1 3165 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 TANC1Q9C0D5 1861 aa28.87■■■□□ 2.21
FANCA-228ENST00000567943 FIBPO43427 364 aa28.86■■■□□ 2.21
FANCA-228ENST00000567943 SMAD3P84022 425 aaKnown RBP28.86■■■□□ 2.21
FANCA-228ENST00000567943 FAM109BQ6ICB4 259 aaPredicted RBP28.86■■■□□ 2.21
FANCA-228ENST00000567943 C16orf70Q9BSU1 422 aa28.86■■■□□ 2.21
FANCA-228ENST00000567943 MLXIPQ9HAP2 919 aa28.86■■■□□ 2.21
FANCA-228ENST00000567943 NCOA5Q9HCD5 579 aaKnown RBP28.86■■■□□ 2.21
FANCA-228ENST00000567943 RIC8AQ9NPQ8 531 aa28.86■■■□□ 2.21
FANCA-228ENST00000567943 BARHL2Q9NY43 387 aa28.86■■■□□ 2.21
FANCA-228ENST00000567943 HDAC6Q9UBN7 1215 aa28.86■■■□□ 2.21
FANCA-228ENST00000567943 CHD9Q3L8U1 2897 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 hCG_1984214I3L0E3 225 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 ITGB5P18084 799 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 MFSD10Q14728 455 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 KIAA0753Q2KHM9 967 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 PPP1R18Q6NYC8 613 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 CYFIP1Q7L576 1253 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 ZNF713Q8N859 430 aaPredicted RBP28.85■■■□□ 2.21
FANCA-228ENST00000567943 GTF2IRD1Q9UHL9 959 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 TET1Q8NFU7 2136 aa28.85■■■□□ 2.21
FANCA-228ENST00000567943 HIC1Q14526 733 aa28.84■■■□□ 2.21
FANCA-228ENST00000567943 NTRK3Q16288 839 aa28.84■■■□□ 2.21
FANCA-228ENST00000567943 PTGISQ16647 500 aa28.84■■■□□ 2.21
FANCA-228ENST00000567943 PFKFB3Q16875 520 aaPredicted RBP28.84■■■□□ 2.21
FANCA-228ENST00000567943 METTL7BQ6UX53 244 aa28.84■■■□□ 2.21
FANCA-228ENST00000567943 PHKBQ93100 1093 aa28.84■■■□□ 2.21
FANCA-228ENST00000567943 ALG1Q9BT22 464 aa28.84■■■□□ 2.21
FANCA-228ENST00000567943 SPDYE3A6NKU9 549 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 ADAMTS3O15072 1205 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 ATP9AO75110 1047 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 PPFIA3O75145 1194 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 NEDD9Q14511 834 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 PKN1Q16512 942 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 PSRC1Q6PGN9 363 aaPredicted RBP28.83■■■□□ 2.21
FANCA-228ENST00000567943 ZNF274Q96GC6 653 aaPredicted RBP28.83■■■□□ 2.21
FANCA-228ENST00000567943 SENP7Q9BQF6 1050 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 CXXC1Q9P0U4 656 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms