RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 EMID1Q96A84 441 aaPredicted RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 RNF26Q9BY78 433 aaPredicted RBP15.37■□□□□ 0.05
CLK3-218ENST00000566926 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 RIC8AQ9NPQ8 531 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 TMEM39AQ9NV64 488 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 TPCN1Q9ULQ1 816 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 DOCK5Q9H7D0 1870 aa15.37■□□□□ 0.05
CLK3-218ENST00000566926 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 STXBP3O00186 592 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 CPLX1O14810 134 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 KIAA0355O15063 1070 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 IFNAR1P17181 557 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 PTGS1P23219 599 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 MCTP2Q6DN12 878 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 TRIM22Q8IYM9 498 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 IL31RAQ8NI17 732 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 CDHR1Q96JP9 859 aa15.36■□□□□ 0.05
CLK3-218ENST00000566926 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
CLK3-218ENST00000566926 UBE2OQ9C0C9 1292 aaKnown RBP15.36■□□□□ 0.05
CLK3-218ENST00000566926 FIBPO43427 364 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 PFKFB2O60825 505 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 RGS20O76081 388 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 MMP3P08254 477 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 RAG1P15918 1043 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 ICAM3P32942 547 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 CCT2P78371 535 aaKnown RBP15.35■□□□□ 0.05
CLK3-218ENST00000566926 MRPS9P82933 396 aaKnown RBP15.35■□□□□ 0.05
CLK3-218ENST00000566926 MDM2Q00987 491 aaPredicted RBP15.35■□□□□ 0.05
CLK3-218ENST00000566926 FAAP100Q0VG06 881 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 AP3B2Q13367 1082 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 NEDD9Q14511 834 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 DGKDQ16760 1214 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 ME3Q16798 604 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 PPTC7Q8NI37 304 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 AFG1LQ8WV93 481 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 LLPHQ9BRT6 129 aaKnown RBP15.35■□□□□ 0.05
CLK3-218ENST00000566926 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
CLK3-218ENST00000566926 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
CLK3-218ENST00000566926 ESYT2A0FGR8 921 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 MAFGO15525 162 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 GGPS1O95749 300 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 SUPT20HL2P0C7V6 817 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 GNA11P29992 359 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 PTPN11Q06124 597 aaPredicted RBP15.34■□□□□ 0.05
CLK3-218ENST00000566926 SSRP1Q08945 709 aaKnown RBP15.34■□□□□ 0.05
CLK3-218ENST00000566926 NTRK3Q16288 839 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 UBE2SQ16763 222 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 CELF3Q5SZQ8 465 aaKnown RBP15.34■□□□□ 0.05
CLK3-218ENST00000566926 FAM126BQ8IXS8 530 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 GIMAP8Q8ND71 665 aaPredicted RBP15.34■□□□□ 0.05
CLK3-218ENST00000566926 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 GPRASP2Q96D09 838 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 KATNAL1Q9BW62 490 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 SLC26A6Q9BXS9 759 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 RTEL1Q9NZ71 1219 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 CHMP5Q9NZZ3 219 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
CLK3-218ENST00000566926 TRIP12Q14669 1992 aaPredicted RBP15.33■□□□□ 0.05
CLK3-218ENST00000566926 TRIM43BA6NCK2 446 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 PPFIA4O75335 1185 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 CDKL5O76039 1030 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 MYSM1Q5VVJ2 828 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 TYW1BQ6NUM6 668 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 SH3RF1Q7Z6J0 888 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 PHKBQ93100 1093 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 TRIM43Q96BQ3 446 aaPredicted RBP15.33■□□□□ 0.04
CLK3-218ENST00000566926 SPATA33Q96N06 139 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 ZMYND12Q9H0C1 365 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 NCOA5Q9HCD5 579 aaKnown RBP15.33■□□□□ 0.04
CLK3-218ENST00000566926 SH3GLB2Q9NR46 395 aa15.33■□□□□ 0.04
CLK3-218ENST00000566926 TIMP1P01033 207 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 CD4P01730 458 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 UBA1P22314 1058 aaKnown RBP15.32■□□□□ 0.04
CLK3-218ENST00000566926 DDIT3P35638 169 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 PSMC6P62333 389 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 NUCB2P80303 420 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 HMGN5P82970 282 aaKnown RBP15.32■□□□□ 0.04
CLK3-218ENST00000566926 PKN1Q16512 942 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 TDHQ8IZJ6 230 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 FAM177A1Q8N128 213 aaPredicted RBP15.32■□□□□ 0.04
CLK3-218ENST00000566926 BADQ92934 168 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 ZFP91Q96JP5 570 aaPredicted RBP15.32■□□□□ 0.04
CLK3-218ENST00000566926 TBX21Q9UL17 535 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 SMC3Q9UQE7 1217 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 GRIN2DO15399 1336 aa15.32■□□□□ 0.04
CLK3-218ENST00000566926 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CLK3-218ENST00000566926 DEXIO95424 95 aa15.31■□□□□ 0.04
CLK3-218ENST00000566926 PDCP20941 246 aa15.31■□□□□ 0.04
CLK3-218ENST00000566926 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
CLK3-218ENST00000566926 SP2Q02086 613 aa15.31■□□□□ 0.04
CLK3-218ENST00000566926 STK3Q13188 491 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms