RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 MYO15AQ9UKN7 3530 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 GFRA3O60609 400 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 ZNF286BP0CG31 522 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 IER5LQ5T953 404 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 SEPT14Q6ZU15 432 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 TOP1MTQ969P6 601 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 MAF1Q9H063 256 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 LMAN2LQ9H0V9 348 aa19.77■□□□□ 0.76
CDH3-205ENST00000566808 TMEM221A6NGB7 291 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 RSPH10B2B2RC85 870 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 M0R296 226 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 SMARCA5O60264 1052 aaPredicted RBP19.76■□□□□ 0.75
CDH3-205ENST00000566808 RANBP6O60518 1105 aaKnown RBP19.76■□□□□ 0.75
CDH3-205ENST00000566808 RSPH10BP0C881 870 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 TOP1P11387 765 aaKnown RBP19.76■□□□□ 0.75
CDH3-205ENST00000566808 TCF15Q12870 199 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 CLUL1Q15846 466 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 TRIM67Q6ZTA4 783 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 SERINC5Q86VE9 423 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 DHX37Q8IY37 1157 aaKnown RBP19.76■□□□□ 0.75
CDH3-205ENST00000566808 RGS22Q8NE09 1264 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 PPTC7Q8NI37 304 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 PBXIP1Q96AQ6 731 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 GPCPD1Q9NPB8 672 aa19.76■□□□□ 0.75
CDH3-205ENST00000566808 STXBP3O00186 592 aa19.75■□□□□ 0.75
CDH3-205ENST00000566808 TBX10O75333 385 aa19.75■□□□□ 0.75
CDH3-205ENST00000566808 CTNNB1P35222 781 aa19.75■□□□□ 0.75
CDH3-205ENST00000566808 THPOP40225 353 aa19.75■□□□□ 0.75
CDH3-205ENST00000566808 DLX2Q07687 328 aaPredicted RBP19.75■□□□□ 0.75
CDH3-205ENST00000566808 SEPT8Q92599 483 aa19.75■□□□□ 0.75
CDH3-205ENST00000566808 SEC62Q99442 399 aaKnown RBP19.75■□□□□ 0.75
CDH3-205ENST00000566808 C11orf84Q9BUA3 381 aaPredicted RBP19.75■□□□□ 0.75
CDH3-205ENST00000566808 C5orf67F2Z3F1 127 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 ORC4O43929 436 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 PDHBP11177 359 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
CDH3-205ENST00000566808 ZNF200P98182 395 aaPredicted RBP19.74■□□□□ 0.75
CDH3-205ENST00000566808 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 HYAL1Q12794 435 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 NSUN6Q8TEA1 469 aaKnown RBP19.74■□□□□ 0.75
CDH3-205ENST00000566808 IWS1Q96ST2 819 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 TMEM47Q9BQJ4 181 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 IFIH1Q9BYX4 1025 aaKnown RBP19.74■□□□□ 0.75
CDH3-205ENST00000566808 CD207Q9UJ71 328 aa19.74■□□□□ 0.75
CDH3-205ENST00000566808 PLXNA3P51805 1871 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 UPP2O95045 317 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 RB1P06400 928 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 ZNF543Q08ER8 600 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 LAMC2Q13753 1193 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 STXBP2Q15833 593 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 USH1GQ495M9 461 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 TSHZ3Q63HK5 1081 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 FBXL6Q8N531 539 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 CHMP4BQ9H444 224 aaKnown RBP19.73■□□□□ 0.75
CDH3-205ENST00000566808 DDX41Q9UJV9 622 aaKnown RBP19.73■□□□□ 0.75
CDH3-205ENST00000566808 ANAPC4Q9UJX5 808 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 RWDD3Q9Y3V2 267 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 VPS13AQ96RL7 3174 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 GVINP1Q7Z2Y8 2422 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 WDR87Q6ZQQ6 2873 aa19.73■□□□□ 0.75
CDH3-205ENST00000566808 RBAK-RBAKDNI3L0D1 243 aa19.72■□□□□ 0.75
CDH3-205ENST00000566808 CAND2O75155 1236 aa19.72■□□□□ 0.75
CDH3-205ENST00000566808 FIBCD1Q8N539 461 aa19.72■□□□□ 0.75
CDH3-205ENST00000566808 IRF2BPLQ9H1B7 796 aa19.72■□□□□ 0.75
CDH3-205ENST00000566808 INCENPQ9NQS7 918 aa19.72■□□□□ 0.75
CDH3-205ENST00000566808 MRVI1Q9Y6F6 885 aa19.72■□□□□ 0.75
CDH3-205ENST00000566808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.71■□□□□ 0.75
CDH3-205ENST00000566808 FOXP2O15409 715 aa19.71■□□□□ 0.75
CDH3-205ENST00000566808 HIC1Q14526 733 aa19.71■□□□□ 0.75
CDH3-205ENST00000566808 ZMYM1Q5SVZ6 1142 aa19.71■□□□□ 0.75
CDH3-205ENST00000566808 SYTL5Q8TDW5 730 aaPredicted RBP19.71■□□□□ 0.75
CDH3-205ENST00000566808 RMDN3Q96TC7 470 aa19.71■□□□□ 0.75
CDH3-205ENST00000566808 KIAA1671Q9BY89 1806 aa19.71■□□□□ 0.75
CDH3-205ENST00000566808 DCHS1Q96JQ0 3298 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 GRM6O15303 877 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 ZXDAP98168 799 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 APBB2Q92870 758 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 IL17RAQ96F46 866 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 TAAR1Q96RJ0 339 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 FAM86C1Q9NVL1 165 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 COL20A1Q9P218 1284 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 ABCB11O95342 1321 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 ADGRA3Q8IWK6 1321 aa19.7■□□□□ 0.74
CDH3-205ENST00000566808 PPFIA4O75335 1185 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 EIF3JO75822 258 aaKnown RBP19.69■□□□□ 0.74
CDH3-205ENST00000566808 EYA4O95677 639 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 MMP1P03956 469 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 FGRP09769 529 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 LINC00271P0C7V0 271 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 SNHG28P0DPA3 235 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 HOXC8P31273 242 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 NDUFV1P49821 464 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 ATP6V0A1Q93050 837 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 PPP2R3CQ969Q6 453 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 FSD1Q9BTV5 496 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 ALG13Q9NP73 1137 aaKnown RBP19.69■□□□□ 0.74
CDH3-205ENST00000566808 TCP11L1Q9NUJ3 509 aa19.69■□□□□ 0.74
CDH3-205ENST00000566808 C17orf102A2RUQ5 167 aa19.68■□□□□ 0.74
CDH3-205ENST00000566808 LOC730098B7Z3J9 87 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms