RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 CALM1P0DP23 149 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 CALM2P0DP24 149 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 CALM3P0DP25 149 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 ACRP10323 421 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 CSF2RAP15509 400 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 CCND2P30279 289 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 CCL23P55773 120 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 PURAQ00577 322 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 TRAF1Q13077 416 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 PGM5Q15124 567 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 ADCK5Q3MIX3 580 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 HEATR3Q7Z4Q2 680 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 SRBD1Q8N5C6 995 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 JAKMIP1Q96N16 626 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 MTG1Q9BT17 334 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 HIPK3Q9H422 1215 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 RANBP2P49792 3224 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 KLF18A0A0U1RQI7 1052 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 TIMP1P01033 207 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 MMP3P08254 477 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 CYP2C9P11712 490 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 GNAQP50148 359 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 CDK7P50613 346 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 SP4Q02446 784 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 PPIGQ13427 754 aaKnown RBP eCLIP11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 RTN1Q16799 776 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 NBPF20Q3BBV1 942 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 LRIT3Q3SXY7 679 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 USP17L6PQ6QN14 398 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 TMTC2Q8N394 836 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 TMEM199Q8N511 208 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 DDX12PQ92771 950 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 SPZ1Q9BXG8 430 aa11.66□□□□□ -0.54
GTF3C1-206ENST00000566779 GRIN2DO15399 1336 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 ZBTB43O43298 467 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 EIF3JO75822 258 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 GGPS1O95749 300 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 LIFRP42702 1097 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 ARHGAP1Q07960 439 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 KRT32Q14532 448 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 UBE2SQ16763 222 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 APOA5Q6Q788 366 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 DHX37Q8IY37 1157 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 FANCBQ8NB91 859 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 SCLYQ96I15 445 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 LZTS2Q9BRK4 669 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 ALDH8A1Q9H2A2 487 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 RTEL1Q9NZ71 1219 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 PKD2L1Q9P0L9 805 aa11.65□□□□□ -0.54
GTF3C1-206ENST00000566779 ZBBXA8MT70 800 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 REC8O95072 547 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 CD4P01730 458 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 UBA1P22314 1058 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 NKX3-2P78367 333 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 CCDC62Q6P9F0 684 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 DEFB128Q7Z7B8 93 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 TET1Q8NFU7 2136 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 SPATA33Q96N06 139 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 DDX41Q9UJV9 622 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
GTF3C1-206ENST00000566779 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 A6NJR5 290 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 NOP56O00567 594 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 KPNA6O60684 536 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 CASTP20810 708 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 NAPAP54920 295 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 DGKDQ16760 1214 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 Q6ZUG5 572 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 ZNF365Q70YC5 407 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 BRF1Q92994 677 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 PSTPIP2Q9H939 334 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 MLXIPQ9HAP2 919 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
GTF3C1-206ENST00000566779 SPDYE3A6NKU9 549 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 RGS20O76081 388 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 SUPT20HL2P0C7V6 817 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 HSPA4P34932 840 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 PSEN2P49810 448 aa11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 METAP2P50579 478 aaKnown RBP eCLIP11.62□□□□□ -0.55
GTF3C1-206ENST00000566779 LAMC2Q13753 1193 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms