RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CCDC85BQ15834 202 aaPredicted RBP17.35■□□□□ 0.37
RNF40-209ENST00000566703 HSDL1Q3SXM5 330 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 TMTC2Q8N394 836 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 MLXIPQ9HAP2 919 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 SENP2Q9HC62 589 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 A0A0C4DFX4 3053 aa17.35■□□□□ 0.37
RNF40-209ENST00000566703 GTPBP6O43824 516 aaPredicted RBP17.34■□□□□ 0.37
RNF40-209ENST00000566703 SP2Q02086 613 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 TAP1Q03518 808 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 TRIM71Q2Q1W2 868 aaKnown RBP17.34■□□□□ 0.37
RNF40-209ENST00000566703 GNPTABQ3T906 1256 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 KIAA1217Q5T5P2 1943 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 MB21D2Q8IYB1 491 aaPredicted RBP17.34■□□□□ 0.37
RNF40-209ENST00000566703 IL31RAQ8NI17 732 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 LZTS2Q9BRK4 669 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 C16orf70Q9BSU1 422 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 TAF6LQ9Y6J9 622 aa17.34■□□□□ 0.37
RNF40-209ENST00000566703 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 TNFRSF10AO00220 468 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 TLL1O43897 1013 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 NBNO60934 754 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 DDAH1O94760 285 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 ZNF286BP0CG31 522 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.36
RNF40-209ENST00000566703 KIF5BP33176 963 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 GNAQP50148 359 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 ANTXR2P58335 489 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 WDR5P61964 334 aaKnown RBP17.33■□□□□ 0.36
RNF40-209ENST00000566703 NEDD9Q14511 834 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 INPP4AQ96PE3 977 aaPredicted RBP17.33■□□□□ 0.36
RNF40-209ENST00000566703 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 MTCH2Q9Y6C9 303 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 MYO9BQ13459 2157 aa17.33■□□□□ 0.36
RNF40-209ENST00000566703 SCN5AQ14524 2016 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 MYH6P13533 1939 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 SPATA31C2B4DYI2 1134 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 MRPS9P82933 396 aaKnown RBP17.32■□□□□ 0.36
RNF40-209ENST00000566703 IKBKEQ14164 716 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 AAK1Q2M2I8 961 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 TRAF7Q6Q0C0 670 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
RNF40-209ENST00000566703 TMEM87BQ96K49 555 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 USP26Q9BXU7 913 aa17.32■□□□□ 0.36
RNF40-209ENST00000566703 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
RNF40-209ENST00000566703 CUL9Q8IWT3 2517 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 EMSYQ7Z589 1322 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 H3BRB1 525 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 PIK3CDO00329 1044 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 FIBPO43427 364 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 HOXC8P31273 242 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 ZNF618Q5T7W0 954 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 METTL7BQ6UX53 244 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 SERINC5Q86VE9 423 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 ZNF654Q8IZM8 581 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 CUL5Q93034 780 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
RNF40-209ENST00000566703 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 ZBED2Q9BTP6 218 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
RNF40-209ENST00000566703 LY9Q9HBG7 655 aa17.31■□□□□ 0.36
RNF40-209ENST00000566703 C17orf102A2RUQ5 167 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 RFXAPO00287 272 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 GNAT1P11488 350 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 ZNF200P98182 395 aaPredicted RBP17.3■□□□□ 0.36
RNF40-209ENST00000566703 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 ARNTL2Q8WYA1 636 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 RAD9AQ99638 391 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 GBF1Q92538 1859 aa17.3■□□□□ 0.36
RNF40-209ENST00000566703 TANC1Q9C0D5 1861 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 RSPH10B2B2RC85 870 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 NOP56O00567 594 aaKnown RBP17.29■□□□□ 0.36
RNF40-209ENST00000566703 CAND2O75155 1236 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 LGR5O75473 907 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 GJB5O95377 273 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 LGALS2P05162 132 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 RSPH10BP0C881 870 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 CALM1P0DP23 149 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 CALM2P0DP24 149 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 CALM3P0DP25 149 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 MCM5P33992 734 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 LIFRP42702 1097 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 HIC1Q14526 733 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 SMARCC2Q8TAQ2 1214 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
RNF40-209ENST00000566703 ATP6V0A1Q93050 837 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 WNT8BQ93098 351 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 ZFP91Q96JP5 570 aaPredicted RBP17.29■□□□□ 0.36
RNF40-209ENST00000566703 CERS4Q9HA82 394 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 SEC63Q9UGP8 760 aaKnown RBP17.29■□□□□ 0.36
RNF40-209ENST00000566703 COG5Q9UP83 839 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 TET1Q8NFU7 2136 aa17.29■□□□□ 0.36
RNF40-209ENST00000566703 TRIP12Q14669 1992 aaPredicted RBP17.28■□□□□ 0.36
RNF40-209ENST00000566703 EPOPA6NHQ4 379 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 MEIS2O14770 477 aa17.28■□□□□ 0.36
RNF40-209ENST00000566703 PRC1O43663 620 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms