RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PLIN2Q99541 437 aa23.86■■□□□ 1.41
SPSB3-208ENST00000566339 MMRN2Q9H8L6 949 aa23.86■■□□□ 1.41
SPSB3-208ENST00000566339 BLOC1S4Q9NUP1 217 aa23.86■■□□□ 1.41
SPSB3-208ENST00000566339 FAM169AQ9Y6X4 670 aa23.86■■□□□ 1.41
SPSB3-208ENST00000566339 IRS2Q9Y4H2 1338 aa23.85■■□□□ 1.41
SPSB3-208ENST00000566339 PLEKP08567 350 aaPredicted RBP23.85■■□□□ 1.41
SPSB3-208ENST00000566339 NOVP48745 357 aa23.85■■□□□ 1.41
SPSB3-208ENST00000566339 MARSP56192 900 aaKnown RBP23.85■■□□□ 1.41
SPSB3-208ENST00000566339 MICALCLQ6ZW33 695 aa23.85■■□□□ 1.41
SPSB3-208ENST00000566339 RRAGAQ7L523 313 aa23.85■■□□□ 1.41
SPSB3-208ENST00000566339 CACNA2D4Q7Z3S7 1137 aa23.85■■□□□ 1.41
SPSB3-208ENST00000566339 IQCKQ8N0W5 287 aa23.85■■□□□ 1.41
SPSB3-208ENST00000566339 SEC63Q9UGP8 760 aaKnown RBP23.85■■□□□ 1.41
SPSB3-208ENST00000566339 NAV1Q8NEY1 1877 aa23.84■■□□□ 1.41
SPSB3-208ENST00000566339 CCT5P48643 541 aa23.84■■□□□ 1.41
SPSB3-208ENST00000566339 SWT1Q5T5J6 900 aaKnown RBP23.84■■□□□ 1.41
SPSB3-208ENST00000566339 NFRKBQ6P4R8 1299 aa23.84■■□□□ 1.41
SPSB3-208ENST00000566339 YTHDF3Q7Z739 585 aaKnown RBP23.84■■□□□ 1.41
SPSB3-208ENST00000566339 ERLIN2O94905 339 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 TECP42680 631 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 FKBP3Q00688 224 aaKnown RBP23.83■■□□□ 1.41
SPSB3-208ENST00000566339 EVX2Q03828 476 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 NAB2Q15742 525 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 HGSNATQ68CP4 663 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 NEDD1Q8NHV4 660 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 HDAC7Q8WUI4 952 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 RAD54LQ92698 747 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 CDK5RAP3Q96JB5 506 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 SLC39A2Q9NP94 309 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 FAM207AQ9NSI2 230 aaPredicted RBP23.83■■□□□ 1.41
SPSB3-208ENST00000566339 PCDHGC5Q9Y5F6 944 aa23.83■■□□□ 1.41
SPSB3-208ENST00000566339 MYMKA6NI61 221 aa23.83■■□□□ 1.4
SPSB3-208ENST00000566339 TMEM119Q4V9L6 283 aa23.83■■□□□ 1.4
SPSB3-208ENST00000566339 CFAP58Q5T655 872 aa23.83■■□□□ 1.4
SPSB3-208ENST00000566339 PPP1R18Q6NYC8 613 aa23.83■■□□□ 1.4
SPSB3-208ENST00000566339 REXO1Q8N1G1 1221 aaKnown RBP23.83■■□□□ 1.4
SPSB3-208ENST00000566339 SMCR8Q8TEV9 937 aaPredicted RBP23.83■■□□□ 1.4
SPSB3-208ENST00000566339 GDAP1L1Q96MZ0 367 aa23.83■■□□□ 1.4
SPSB3-208ENST00000566339 CEP89Q96ST8 783 aa23.83■■□□□ 1.4
SPSB3-208ENST00000566339 GUCY2CP25092 1073 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 ANXA13P27216 316 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 SFMBT2Q5VUG0 894 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 LRIG3Q6UXM1 1119 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 C3orf20Q8ND61 904 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 TBCKQ8TEA7 893 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 PNMA5Q96PV4 448 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 COL4A3BPQ9Y5P4 624 aa23.82■■□□□ 1.4
SPSB3-208ENST00000566339 HMGB1P1B2RPK0 211 aaPredicted RBP23.81■■□□□ 1.4
SPSB3-208ENST00000566339 EPHB6O15197 1021 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 LDHBP07195 334 aaKnown RBP23.81■■□□□ 1.4
SPSB3-208ENST00000566339 RASA1P20936 1047 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 KLRK1P26718 216 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 GTF2A1P52655 376 aaPredicted RBP23.81■■□□□ 1.4
SPSB3-208ENST00000566339 CALCRLQ16602 461 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 TTMPQ5BVD1 217 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 RC3H1Q5TC82 1133 aaKnown RBP23.81■■□□□ 1.4
SPSB3-208ENST00000566339 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 TSEN2Q8NCE0 465 aaKnown RBP23.81■■□□□ 1.4
SPSB3-208ENST00000566339 NLRP3Q96P20 1036 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 ZIM3Q96PE6 472 aa23.81■■□□□ 1.4
SPSB3-208ENST00000566339 NAP1L4Q99733 375 aaKnown RBP23.81■■□□□ 1.4
SPSB3-208ENST00000566339 TNNC1P63316 161 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 ZCWPW2Q504Y3 356 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 KRT79Q5XKE5 535 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 RIOX1Q9H6W3 641 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 RBM12Q9NTZ6 932 aaKnown RBP23.8■■□□□ 1.4
SPSB3-208ENST00000566339 ATP6V0A2Q9Y487 856 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 ATAD5Q96QE3 1844 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 IFI16Q16666 785 aaKnown RBP23.8■■□□□ 1.4
SPSB3-208ENST00000566339 MEI1Q5TIA1 1274 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 C16orf86Q6ZW13 317 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 MYOCDQ8IZQ8 938 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 MICALL1Q8N3F8 863 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 ARFGAP2Q8N6H7 521 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 MTMR8Q96EF0 704 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 AIPL1Q9NZN9 384 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 NARFQ9UHQ1 456 aa23.8■■□□□ 1.4
SPSB3-208ENST00000566339 TAF1LQ8IZX4 1826 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 DDX60LQ5H9U9 1706 aaKnown RBP23.79■■□□□ 1.4
SPSB3-208ENST00000566339 USP17L3A6NCW0 530 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 USP17L4A6NCW7 530 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 MYBP10242 640 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 INPP5BP32019 993 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 CDC37Q16543 378 aaPredicted RBP23.79■■□□□ 1.4
SPSB3-208ENST00000566339 SLC18A3Q16572 532 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 HYIQ5T013 277 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 PPP4R3AQ6IN85 833 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 C15orf52Q6ZUT6 534 aaKnown RBP23.79■■□□□ 1.4
SPSB3-208ENST00000566339 USP17L1Q7RTZ2 530 aa23.79■■□□□ 1.4
SPSB3-208ENST00000566339 ZC3H3Q8IXZ2 948 aaKnown RBP23.79■■□□□ 1.4
SPSB3-208ENST00000566339 BAZ2BQ9UIF8 2168 aaKnown RBP23.79■■□□□ 1.4
SPSB3-208ENST00000566339 RASSF7Q02833 373 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 KCNMA1Q12791 1236 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 PPP4R3CPQ6ZMV5 832 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 LRRC4BQ9NT99 713 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 LEMD3Q9Y2U8 911 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 C10orf71Q711Q0 1435 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 CDK5RAP2Q96SN8 1893 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 KDM3AQ9Y4C1 1321 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 HSPA9P38646 679 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms