RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 JPH4Q96JJ6 628 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 FGD4Q96M96 766 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CCDC134Q9H6E4 229 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ORC4O43929 436 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PRPF4BQ13523 1007 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 FAM180AQ6UWF9 173 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 NME9Q86XW9 330 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KAZALD1Q96I82 304 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ZNF333Q96JL9 665 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PBKQ96KB5 322 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 NLRP2Q9NX02 1062 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TUBA8Q9NY65 449 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 FRMPD1Q5SYB0 1578 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KNDC1Q76NI1 1749 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 RARAP10276 462 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 LMNB1P20700 586 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CARSP49589 748 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 TUBA4AP68366 448 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ZSCAN29Q8IWY8 852 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 FAM13CQ8NE31 585 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 NEK1Q96PY6 1258 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TRIM4Q9C037 500 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TSKSQ9UJT2 592 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 GMEB1Q9Y692 573 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 MAP3K4Q9Y6R4 1608 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CYP1A1P04798 512 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 IDEP14735 1019 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ECHS1P30084 290 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 VAV2P52735 878 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PPP2R2AP63151 447 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 KCNJ2P63252 427 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CDK17Q00537 523 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 PNMA8AQ86V59 439 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 DZIP3Q86Y13 1208 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 SDR16C5Q8N3Y7 309 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 FBF1Q8TES7 1133 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 RSPH1Q8WYR4 309 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 F8VZ95 297 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ATP9BO43861 1147 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 EVI5O60447 810 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ATP6V1C1P21283 382 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 MAP3K7CLP57077 242 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ZNF844Q08AG5 666 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 MTMR3Q13615 1198 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 GNPTABQ3T906 1256 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CCDC122Q5T0U0 273 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 Q6ZNX1 250 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SPATA4Q8NEY3 305 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 STK32AQ8WU08 396 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 C8orf76Q96K31 380 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 INPP4AQ96PE3 977 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 TLE6Q9H808 572 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 DMAP1Q9NPF5 467 aaPredicted RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 DDX43Q9NXZ2 648 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 FBXL5Q9UKA1 691 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CCDC85CA6NKD9 419 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ITGA2BP08514 1039 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TCP1P17987 556 aaKnown RBP3.18□□□□□ -1.9
CHD9-218ENST00000566029 KIF5BP33176 963 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SOX11P35716 441 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 GUCY1B3Q02153 619 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 C2orf54Q08AI8 447 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ANKRD20A2Q5SQ80 823 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 TTC39AQ5SRH9 613 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ANKRD20A1Q5TYW2 823 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 ANKRD20A3Q5VUR7 823 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SPATA24Q86W54 205 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 SLC39A3Q9BRY0 314 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 OCEL1Q9H607 264 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 CPDO75976 1380 aa3.18□□□□□ -1.9
CHD9-218ENST00000566029 GRID2IPA4D2P6 1211 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SIGLEC16A6NMB1 481 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 LZTS3O60299 673 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ZBTB48P10074 688 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 GNAZP19086 355 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ATICP31939 592 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 MAGEA10P43363 369 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 SCNN1BP51168 640 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PPP1R7Q15435 360 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 MYLK4Q86YV6 388 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 NUTM2AQ8IVF1 878 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 PHACTR1Q9C0D0 580 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SCHIP1Q9P0W5 487 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 TTC26A0AVF1 554 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ENC1O14682 589 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 CPLX1O14810 134 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 DDX58O95786 925 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 ALDH5A1P51649 535 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 AIMP1Q12904 312 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 LSAMPQ13449 338 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 SEPT2Q15019 361 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 PKN1Q16512 942 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 USH1GQ495M9 461 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 HDGFL1Q5TGJ6 251 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 ENDOVQ8N8Q3 282 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 UTP4Q969X6 686 aaKnown RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 EFHD2Q96C19 240 aaPredicted RBP3.17□□□□□ -1.9
CHD9-218ENST00000566029 TRIM11Q96F44 468 aa3.17□□□□□ -1.9
CHD9-218ENST00000566029 EPSTI1Q96J88 318 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms