RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 RILPL1Q5EBL4 403 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 EEPD1Q7L9B9 569 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 NLRX1Q86UT6 975 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 FBXO16Q8IX29 292 aaPredicted RBP14.33□□□□□ -0.12
SF3B3-206ENST00000565990 SH3TC2Q8TF17 1288 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 ZFP91Q96JP5 570 aaPredicted RBP14.33□□□□□ -0.12
SF3B3-206ENST00000565990 SENP7Q9BQF6 1050 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 WDR11Q9BZH6 1224 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 Q9Y3F1 56 aa14.33□□□□□ -0.12
SF3B3-206ENST00000565990 SEPT4O43236 478 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 BAG4O95429 457 aaKnown RBP14.32□□□□□ -0.12
SF3B3-206ENST00000565990 ARP10275 920 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 GCFC2P16383 781 aaKnown RBP14.32□□□□□ -0.12
SF3B3-206ENST00000565990 ZNF76P36508 570 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 NKX3-2P78367 333 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 SP2Q02086 613 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 ORC2Q13416 577 aaPredicted RBP14.32□□□□□ -0.12
SF3B3-206ENST00000565990 LETM2Q2VYF4 491 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 SEPT14Q6ZU15 432 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 ZNF333Q96JL9 665 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 MCOLN1Q9GZU1 580 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 HMX1Q9NP08 348 aaPredicted RBP14.32□□□□□ -0.12
SF3B3-206ENST00000565990 KCNH7Q9NS40 1196 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 FAM184BQ9ULE4 1060 aa14.32□□□□□ -0.12
SF3B3-206ENST00000565990 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
SF3B3-206ENST00000565990 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 WNT7AO00755 349 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 TBX3O15119 743 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 FIBPO43427 364 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 ATP9AO75110 1047 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 ARIH2O95376 493 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 F13A1P00488 732 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 TXNP10599 105 aaKnown RBP14.31□□□□□ -0.12
SF3B3-206ENST00000565990 AKR1A1P14550 325 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 SMPD1P17405 629 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 CCND3P30281 292 aaPredicted RBP14.31□□□□□ -0.12
SF3B3-206ENST00000565990 ADCYAP1R1P41586 468 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 ZNF445P59923 1031 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 MTMR1Q13613 665 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 TMEM63BQ5T3F8 832 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 MYSM1Q5VVJ2 828 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 LHX8Q68G74 356 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 C4orf32Q8N8J7 132 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 MTMR9Q96QG7 549 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 AGO4Q9HCK5 861 aaKnown RBP14.31□□□□□ -0.12
SF3B3-206ENST00000565990 PAK6Q9NQU5 681 aaPredicted RBP14.31□□□□□ -0.12
SF3B3-206ENST00000565990 NOL7Q9UMY1 257 aaKnown RBP14.31□□□□□ -0.12
SF3B3-206ENST00000565990 DOCK5Q9H7D0 1870 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 TCHHQ07283 1943 aa14.31□□□□□ -0.12
SF3B3-206ENST00000565990 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 NKRFO15226 690 aaKnown RBP eCLIP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 MSH4O15457 936 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 DHX15O43143 795 aaKnown RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 ADCY6O43306 1168 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 CCNT1O60563 726 aaKnown RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 DUSP11O75319 330 aaKnown RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 TDP2O95551 362 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 KCNA2P16389 499 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 TNFAIP2Q03169 654 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 LY6KQ17RY6 165 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 PRR16Q569H4 304 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 TTC38Q5R3I4 469 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 PLA2G4DQ86XP0 818 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 ETNPPLQ8TBG4 499 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 UNC93B1Q9H1C4 597 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 DDX25Q9UHL0 483 aaKnown RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
SF3B3-206ENST00000565990 PCDHB6Q9Y5E3 794 aa14.3□□□□□ -0.12
SF3B3-206ENST00000565990 SLC37A4O43826 429 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 MSCO60682 206 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 NEDD9Q14511 834 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 MTFR1Q15390 333 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 ZNF174Q15697 407 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 COL13A1Q5TAT6 717 aaPredicted RBP14.29□□□□□ -0.12
SF3B3-206ENST00000565990 ATL3Q6DD88 541 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
SF3B3-206ENST00000565990 HAS1Q92839 578 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 SLC5A5Q92911 643 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 FAM20AQ96MK3 541 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 KCNMB3Q9NPA1 279 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 DDX20Q9UHI6 824 aaKnown RBP14.29□□□□□ -0.12
SF3B3-206ENST00000565990 MRVI1Q9Y6F6 885 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 NFASCO94856 1347 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 WDR81Q562E7 1941 aa14.29□□□□□ -0.12
SF3B3-206ENST00000565990 IPO5O00410 1097 aaKnown RBP14.28□□□□□ -0.12
SF3B3-206ENST00000565990 CCL5P13501 91 aa14.28□□□□□ -0.12
SF3B3-206ENST00000565990 CNGA1P29973 690 aa14.28□□□□□ -0.12
SF3B3-206ENST00000565990 CLCN1P35523 988 aa14.28□□□□□ -0.12
SF3B3-206ENST00000565990 ITGB3BPQ13352 177 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms