RNA–Protein interactions for RNA: ENST00000565891.1

SPG7-212, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-212ENST00000565891 MTA3Q9BTC8 594 aa17.22■□□□□ 0.35
SPG7-212ENST00000565891 MLXIPQ9HAP2 919 aa17.22■□□□□ 0.35
SPG7-212ENST00000565891 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
SPG7-212ENST00000565891 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 SORBS3O60504 671 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 CA3P07451 260 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 UBA1P22314 1058 aaKnown RBP17.21■□□□□ 0.35
SPG7-212ENST00000565891 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 KCNJ6P48051 423 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 RBL2Q08999 1139 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 PTK7Q13308 1070 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
SPG7-212ENST00000565891 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 GNPTABQ3T906 1256 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 TJAP1Q5JTD0 557 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 HERC6Q8IVU3 1022 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 DHX38Q92620 1227 aaKnown RBP17.21■□□□□ 0.35
SPG7-212ENST00000565891 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
SPG7-212ENST00000565891 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
SPG7-212ENST00000565891 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 LY9Q9HBG7 655 aa17.21■□□□□ 0.35
SPG7-212ENST00000565891 PRC1O43663 620 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 STAM2O75886 525 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 DDAH1O94760 285 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 CKBP12277 381 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 MCM5P33992 734 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 GNAQP50148 359 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 GPNMBQ14956 572 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 NFXL1Q6ZNB6 911 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 ATXN2LQ8WWM7 1075 aaKnown RBP17.2■□□□□ 0.34
SPG7-212ENST00000565891 SPZ1Q9BXG8 430 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 PRDM6Q9NQX0 595 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 SCN5AQ14524 2016 aa17.2■□□□□ 0.34
SPG7-212ENST00000565891 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
SPG7-212ENST00000565891 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
SPG7-212ENST00000565891 CUL5Q93034 780 aa17.19■□□□□ 0.34
SPG7-212ENST00000565891 TMEM87BQ96K49 555 aa17.19■□□□□ 0.34
SPG7-212ENST00000565891 C16orf70Q9BSU1 422 aa17.19■□□□□ 0.34
SPG7-212ENST00000565891 LSG1Q9H089 658 aaKnown RBP17.19■□□□□ 0.34
SPG7-212ENST00000565891 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
SPG7-212ENST00000565891 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
SPG7-212ENST00000565891 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 SPATA31C2B4DYI2 1134 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 NOP56O00567 594 aaKnown RBP17.18■□□□□ 0.34
SPG7-212ENST00000565891 CXCL10P02778 98 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 ICAM3P32942 547 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 MRPS9P82933 396 aaKnown RBP17.18■□□□□ 0.34
SPG7-212ENST00000565891 ZNF200P98182 395 aaPredicted RBP17.18■□□□□ 0.34
SPG7-212ENST00000565891 NEDD9Q14511 834 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 INPP4AQ96PE3 977 aaPredicted RBP17.18■□□□□ 0.34
SPG7-212ENST00000565891 MYL10Q9BUA6 226 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 THEGQ9P2T0 379 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 TRIP12Q14669 1992 aaPredicted RBP17.18■□□□□ 0.34
SPG7-212ENST00000565891 TET1Q8NFU7 2136 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 VCANP13611 3396 aa17.18■□□□□ 0.34
SPG7-212ENST00000565891 ABHD14A-ACY1A0A1B0GW23 586 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 H3BRB1 525 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 SH2B2O14492 632 aaPredicted RBP17.17■□□□□ 0.34
SPG7-212ENST00000565891 SLC27A2O14975 620 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 FIBPO43427 364 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 TLL1O43897 1013 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 NBNO60934 754 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 EFCAB14O75071 495 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 CALM1P0DP23 149 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 CALM2P0DP24 149 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 CALM3P0DP25 149 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 WDR5P61964 334 aaKnown RBP17.17■□□□□ 0.34
SPG7-212ENST00000565891 TRIM71Q2Q1W2 868 aaKnown RBP17.17■□□□□ 0.34
SPG7-212ENST00000565891 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 ZBED2Q9BTP6 218 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 USP26Q9BXU7 913 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 TUT1Q9H6E5 874 aaKnown RBP17.17■□□□□ 0.34
SPG7-212ENST00000565891 CERS4Q9HA82 394 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
SPG7-212ENST00000565891 GBF1Q92538 1859 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 MYH7BA7E2Y1 1941 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 C17orf102A2RUQ5 167 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 RFXAPO00287 272 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 PIK3CDO00329 1044 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
SPG7-212ENST00000565891 POU3F3P20264 500 aaPredicted RBP17.16■□□□□ 0.34
SPG7-212ENST00000565891 LIFRP42702 1097 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 MRPS5P82675 430 aaKnown RBP17.16■□□□□ 0.34
SPG7-212ENST00000565891 TAP1Q03518 808 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 IKBKEQ14164 716 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 HIC1Q14526 733 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 ZNF618Q5T7W0 954 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 CREB3L3Q68CJ9 461 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 METTL7BQ6UX53 244 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 SERINC5Q86VE9 423 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
SPG7-212ENST00000565891 SRBD1Q8N5C6 995 aaKnown RBP17.16■□□□□ 0.34
SPG7-212ENST00000565891 ARNTL2Q8WYA1 636 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms