RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 GGPS1O95749 300 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 CSF2RAP15509 400 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 UBA1P22314 1058 aaKnown RBP19.22■□□□□ 0.67
USB1-211ENST00000565662 TMEM63BQ5T3F8 832 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 C7orf31Q8N865 590 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 AFAP1L1Q8TED9 768 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 HERVK_113Q902F9 699 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 USP26Q9BXU7 913 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 ZNF215Q9UL58 517 aaPredicted RBP19.22■□□□□ 0.67
USB1-211ENST00000565662 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
USB1-211ENST00000565662 KLF18A0A0U1RQI7 1052 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 MEIS2O14770 477 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 FGBP02675 491 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 METAP2P50579 478 aaKnown RBP eCLIP19.21■□□□□ 0.67
USB1-211ENST00000565662 RBL2Q08999 1139 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 AP3B2Q13367 1082 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 RAB30Q15771 203 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 TMEM240Q5SV17 173 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 HEATR3Q7Z4Q2 680 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 JAKMIP1Q96N16 626 aaKnown RBP19.21■□□□□ 0.67
USB1-211ENST00000565662 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.21■□□□□ 0.67
USB1-211ENST00000565662 LRRC2Q9BYS8 371 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 TRPV6Q9H1D0 765 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 MTMR10Q9NXD2 777 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
USB1-211ENST00000565662 SZT2Q5T011 3432 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 RGS20O76081 388 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 GNAT1P11488 350 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 RXRAP19793 462 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 CYP2C18P33260 490 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 NAPAP54920 295 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 PTGISQ16647 500 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 RASIP1Q5U651 963 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 RASEFQ8IZ41 740 aa19.2■□□□□ 0.66
USB1-211ENST00000565662 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 RPLP2P05387 115 aaKnown RBP19.19■□□□□ 0.66
USB1-211ENST00000565662 PSEN2P49810 448 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 AKAP17AQ02040 695 aaKnown RBP19.19■□□□□ 0.66
USB1-211ENST00000565662 MFSD10Q14728 455 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 ADCK5Q3MIX3 580 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 IL31RAQ8NI17 732 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 TNPO1Q92973 898 aaKnown RBP19.19■□□□□ 0.66
USB1-211ENST00000565662 AGXT2Q9BYV1 514 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 RIC8AQ9NPQ8 531 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 TRMT13Q9NUP7 481 aaKnown RBP19.19■□□□□ 0.66
USB1-211ENST00000565662 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 SNX14Q9Y5W7 946 aa19.19■□□□□ 0.66
USB1-211ENST00000565662 HAS3O00219 553 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 EFCAB14O75071 495 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 CAND2O75155 1236 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 BAIAP3O94812 1187 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 RPS6KB1P23443 525 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 ADCY7P51828 1080 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 MRPS9P82933 396 aaKnown RBP19.18■□□□□ 0.66
USB1-211ENST00000565662 PTK7Q13308 1070 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 KIAA0753Q2KHM9 967 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 ZNF365Q70YC5 407 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 FAM177A1Q8N128 213 aaPredicted RBP19.18■□□□□ 0.66
USB1-211ENST00000565662 TM6SF1Q9BZW5 370 aa19.18■□□□□ 0.66
USB1-211ENST00000565662 ESYT2A0FGR8 921 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 PTGS1P23219 599 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 EPHB4P54760 987 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 HSDL1Q3SXM5 330 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 SKAP1Q86WV1 359 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 CCDC82Q8N4S0 544 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 CCDC148Q8NFR7 591 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 BICD2Q8TD16 824 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 KAT2BQ92831 832 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 WNT8AQ9H1J5 351 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 MSRAQ9UJ68 235 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 NAP1L2Q9ULW6 460 aaPredicted RBP19.17■□□□□ 0.66
USB1-211ENST00000565662 EMSYQ7Z589 1322 aa19.17■□□□□ 0.66
USB1-211ENST00000565662 DNAJB2P25686 324 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 GNA11P29992 359 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 CCL23P55773 120 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 MTMR1Q13613 665 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 CPLX2Q6PUV4 134 aaKnown RBP19.16■□□□□ 0.66
USB1-211ENST00000565662 Q6ZUG5 572 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 BRF1Q92994 677 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 SLC9A7Q96T83 725 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
USB1-211ENST00000565662 PCDHA6Q9UN73 950 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 PCDHA8Q9Y5H6 950 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 CYP46A1Q9Y6A2 500 aa19.16■□□□□ 0.66
USB1-211ENST00000565662 H3BRB1 525 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 CYP2C9P11712 490 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 SELPP16109 830 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 FUT2Q10981 343 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 PFKFB3Q16875 520 aaPredicted RBP19.15■□□□□ 0.66
USB1-211ENST00000565662 WWC2Q6AWC2 1192 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 CMTR1Q8N1G2 835 aaKnown RBP19.15■□□□□ 0.66
USB1-211ENST00000565662 PHOSPHO2Q8TCD6 241 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 TUT1Q9H6E5 874 aaKnown RBP19.15■□□□□ 0.66
USB1-211ENST00000565662 BRPF3Q9ULD4 1205 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 SLC4A7Q9Y6M7 1214 aa19.15■□□□□ 0.66
USB1-211ENST00000565662 LGALS2P05162 132 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 IQCF3P0C7M6 154 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 ZNF286BP0CG31 522 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms