RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 APBB2Q92870 758 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 RMDN1Q96DB5 314 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 STRBPQ96SI9 672 aaKnown RBP10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 CNTNAP3Q9BZ76 1288 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 PUS7LQ9H0K6 701 aaKnown RBP10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 IL1RAPL2Q9NP60 686 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 PLAGL2Q9UPG8 496 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 SCN10AQ9Y5Y9 1956 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 MYO15AQ9UKN7 3530 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 NFIBO00712 420 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 ARIH2O95376 493 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 PDGFBP01127 241 aaPredicted RBP10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 ZNF200P98182 395 aaPredicted RBP10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 TFAP4Q01664 338 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 ARHGAP1Q07960 439 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 LAMC2Q13753 1193 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 ASTLQ6HA08 431 aaPredicted RBP10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 SEPT14Q6ZU15 432 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 RHPN1Q8TCX5 695 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 KCNG4Q8TDN1 519 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 SEMA4AQ9H3S1 761 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 EXOC6BQ9Y2D4 811 aa10.68□□□□□ -0.7
VPS9D1-205ENST00000565452 TRIP12Q14669 1992 aaPredicted RBP10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 DCHS1Q96JQ0 3298 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 HAS3O00219 553 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 PPFIA4O75335 1185 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 SLC3A2P08195 630 aaKnown RBP10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 NRIP1P48552 1158 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 CLCN5P51795 746 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 RPS6P62753 249 aaKnown RBP10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 BTG3Q14201 252 aaPredicted RBP10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 RBM23Q86U06 439 aaKnown RBP10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 SERINC5Q86VE9 423 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 TMEM57Q8N5G2 664 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 TMEM105Q8N8V8 129 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 KREMEN2Q8NCW0 462 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 P2RX5Q93086 422 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 WNT8BQ93098 351 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 RANBP17Q9H2T7 1088 aaKnown RBP10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 C1orf115Q9H7X2 142 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 TLE6Q9H808 572 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 SIP14410 1827 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 GVINP1Q7Z2Y8 2422 aa10.67□□□□□ -0.7
VPS9D1-205ENST00000565452 DMDP11532 3685 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 TPRP12270 2363 aaKnown RBP10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 FSD2A1L4K1 749 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 CAND2O75155 1236 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 CSPG5O95196 566 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 APPP05067 770 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 ATP5JP18859 108 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 TDO2P48775 406 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 CAMK1Q14012 370 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 STXBP2Q15833 593 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 SLC30A10Q6XR72 485 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 RGS22Q8NE09 1264 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 SPPL3Q8TCT6 385 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 CLEC4DQ8WXI8 215 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 ATP6V0A1Q93050 837 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 EMID1Q96A84 441 aaPredicted RBP10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 HAUS7Q99871 368 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 MFSD1Q9H3U5 465 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 STX8Q9UNK0 236 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 COL4A6Q14031 1691 aa10.66□□□□□ -0.7
VPS9D1-205ENST00000565452 C17orf102A2RUQ5 167 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 F2P00734 622 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 LMNAP02545 664 aaKnown RBP10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 GNAT2P19087 354 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 MTMR3Q13615 1198 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 SYDE2Q5VT97 1194 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 BTNL9Q6UXG8 535 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 PPTC7Q8NI37 304 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 MICAL1Q8TDZ2 1067 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 DCAF4Q8WV16 495 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 SUSD6Q92537 303 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 KIF1BPQ96EK5 621 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 YTHDC1Q96MU7 727 aaKnown RBP10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 IWS1Q96ST2 819 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 MAF1Q9H063 256 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 BCL11AQ9H165 835 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 DDX41Q9UJV9 622 aaKnown RBP10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 BARX2Q9UMQ3 279 aaPredicted RBP10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 SORCS3Q9UPU3 1222 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 TNNQ9UQP3 1299 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 NR2E1Q9Y466 385 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 PCDHGC5Q9Y5F6 944 aa10.65□□□□□ -0.7
VPS9D1-205ENST00000565452 ADGRA3Q8IWK6 1321 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 PATL2C9JE40 543 aaKnown RBP10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 ENPP3O14638 875 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 CHGBP05060 677 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 LINC00271P0C7V0 271 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 SRGAP2BP0DMP2 458 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 GNAT1P11488 350 aa10.64□□□□□ -0.71
VPS9D1-205ENST00000565452 DNAJB1P25685 340 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms