RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 TMEM119Q4V9L6 283 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 SND1Q7KZF4 910 aaKnown RBP eCLIP17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 DNAJC19Q96DA6 116 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 TBC1D7Q9P0N9 293 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 AKR1B1P15121 316 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 ZNF572Q7Z3I7 529 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 MYOCDQ8IZQ8 938 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 HAS1Q92839 578 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 TLR10Q9BXR5 811 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 FGFBP2Q9BYJ0 223 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 HYOU1Q9Y4L1 999 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 GOLGA6BA6NDN3 693 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 TRAF5O00463 557 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 TCP1P17987 556 aaKnown RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 COASYQ13057 564 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 PSMD2Q13200 908 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 TDRD12Q587J7 1177 aaKnown RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 FAM163AQ96GL9 167 aaPredicted RBP17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 TSG101Q99816 390 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 JMJD4Q9H9V9 463 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 RIC8AQ9NPQ8 531 aa17.12■□□□□ 0.33
GTF3C1-205ENST00000564747 PJA2O43164 708 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 SSBP05455 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 APBA1Q02410 837 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 ITIH3Q06033 890 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 CCDC181Q5TID7 509 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 DDX25Q9UHL0 483 aaKnown RBP17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 TLR2O60603 784 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 NAP1L1P55209 391 aaKnown RBP17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 SKIDA1Q1XH10 827 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 ZCWPW2Q504Y3 356 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 KLHDC7AQ5VTJ3 777 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 COL4A3BPQ9Y5P4 624 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 NOL4O94818 638 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 SNHG28P0DPA3 235 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 SLC16A2P36021 539 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 PANK4Q9NVE7 773 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 POLLQ9UGP5 575 aa17.11■□□□□ 0.33
GTF3C1-205ENST00000564747 GAKO14976 1311 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 MARCH6O60337 910 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 CCDC40Q4G0X9 1142 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 DAGLAQ9Y4D2 1042 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 PNMA6FA0A0J9YX94 578 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 NELFCDQ8IXH7 590 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 PROM2Q8N271 834 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 NOX5Q96PH1 765 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 LRRC27Q9C0I9 530 aa17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 RBM12Q9NTZ6 932 aaKnown RBP17.1■□□□□ 0.33
GTF3C1-205ENST00000564747 SSU72P8A0A1W2PR75 194 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 E9PMD0 336 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 PAFAH1B1P43034 410 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 POLR2FP61218 127 aaKnown RBP17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 GABPAQ06546 454 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 FAM26FQ5R3K3 315 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 STIM2Q9P246 746 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 GOLGA6CA6NDK9 693 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 ANKRD65E5RJM6 399 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 GOLGA6DP0CG33 693 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 CLK2P49760 499 aaKnown RBP17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 DNA2P51530 1060 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 ZNF543Q08ER8 600 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 EFCC1Q9HA90 598 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 GOLGA6AQ9NYA3 693 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 CEP72Q9P209 647 aa17.09■□□□□ 0.33
GTF3C1-205ENST00000564747 F8W031 263 aaPredicted RBP17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 SFMBT2Q5VUG0 894 aa17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 FAM76AQ8TAV0 307 aa17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 LSM14BQ9BX40 385 aaKnown RBP17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.33
GTF3C1-205ENST00000564747 IGKV6D-41A0A0C4DH26 115 aa17.08■□□□□ 0.32
GTF3C1-205ENST00000564747 GTF2IP78347 998 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms