RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ADCY7P51828 1080 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 EVCP57679 992 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 AKAP17AQ02040 695 aaKnown RBP21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 SP2Q02086 613 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 FPGSQ05932 587 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 TOB2Q14106 344 aaPredicted RBP21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 PFKFB3Q16875 520 aaPredicted RBP21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 LRIT3Q3SXY7 679 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 MYSM1Q5VVJ2 828 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 NFRKBQ6P4R8 1299 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 NLRX1Q86UT6 975 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 SPATA33Q96N06 139 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 INPP4AQ96PE3 977 aaPredicted RBP21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 PPP1R12CQ9BZL4 782 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 GLT8D2Q9H1C3 349 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 RIC8AQ9NPQ8 531 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 PDRG1Q9NUG6 133 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 BARHL2Q9NY43 387 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 NID2Q14112 1375 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 FIBPO43427 364 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 SCG2P13521 617 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 UBA1P22314 1058 aaKnown RBP21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 ICAM3P32942 547 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 CCT2P78371 535 aaKnown RBP21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 MFSD5Q6N075 450 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 TEX2Q8IWB9 1127 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 TMEM199Q8N511 208 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 HIPK3Q9H422 1215 aa21.04■□□□□ 0.96
SYNGR3-204ENST00000564642 SPATA31C2B4DYI2 1134 aa21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 PRPF3O43395 683 aaKnown RBP21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 PTPN11Q06124 597 aaPredicted RBP21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 NEDD9Q14511 834 aa21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 SHHQ15465 462 aa21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 TYW1BQ6NUM6 668 aa21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 KATNAL1Q9BW62 490 aa21.03■□□□□ 0.96
SYNGR3-204ENST00000564642 SOX1O00570 391 aaPredicted RBP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 PPFIA4O75335 1185 aa21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 FOSP01100 380 aaPredicted RBP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 ANAPC15P60006 121 aa21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 PPIGQ13427 754 aaKnown RBP eCLIP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 HSDL1Q3SXM5 330 aa21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 CCDC12Q8WUD4 166 aaPredicted RBP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 PPP1R13LQ8WUF5 828 aa21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 PHKBQ93100 1093 aa21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 ZNF274Q96GC6 653 aaPredicted RBP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 LARP6Q9BRS8 491 aaKnown RBP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 TRMT13Q9NUP7 481 aaKnown RBP21.02■□□□□ 0.96
SYNGR3-204ENST00000564642 DOCK5Q9H7D0 1870 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 NOP56O00567 594 aaKnown RBP21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 CYP2C18P33260 490 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 C9orf50Q5SZB4 431 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 KAT2BQ92831 832 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 GPRASP2Q96D09 838 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 LRCH3Q96II8 777 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 CDHR1Q96JP9 859 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 SLC26A6Q9BXS9 759 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 RNF26Q9BY78 433 aaPredicted RBP21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 NCOA5Q9HCD5 579 aaKnown RBP21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 NOD1Q9Y239 953 aa21.01■□□□□ 0.95
SYNGR3-204ENST00000564642 CPLX1O14810 134 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 IFNAR1P17181 557 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 PSEN2P49810 448 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 SEMA3FQ13275 785 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 NTRK3Q16288 839 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 METTL7BQ6UX53 244 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 CYFIP1Q7L576 1253 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 GIMAP8Q8ND71 665 aaPredicted RBP21■□□□□ 0.95
SYNGR3-204ENST00000564642 SENP7Q9BQF6 1050 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 ALG1Q9BT22 464 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 C6orf50Q9HD87 102 aa21■□□□□ 0.95
SYNGR3-204ENST00000564642 PPFIA3O75145 1194 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 ZNF286BP0CG31 522 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 CYP2C9P11712 490 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 CSF2RAP15509 400 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 EPHB4P54760 987 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 STK3Q13188 491 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 AP3B2Q13367 1082 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 MTMR1Q13613 665 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 MFSD10Q14728 455 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 PKN1Q16512 942 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 CPLX2Q6PUV4 134 aaKnown RBP20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 TRIM22Q8IYM9 498 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 C7orf31Q8N865 590 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 PGBD1Q96JS3 809 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 NOC4LQ9BVI4 516 aaKnown RBP20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 ANO3Q9BYT9 981 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 BCAS3Q9H6U6 928 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 UBIAD1Q9Y5Z9 338 aa20.99■□□□□ 0.95
SYNGR3-204ENST00000564642 MAFGO15525 162 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 F2P00734 622 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 HOXD8P13378 290 aaPredicted RBP20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 ITGB5P18084 799 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 CCL23P55773 120 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 SSRP1Q08945 709 aaKnown RBP20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 PTGISQ16647 500 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 KIAA0753Q2KHM9 967 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 SESTD1Q86VW0 696 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 RNPC3Q96LT9 517 aaKnown RBP20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 ZMYND12Q9H0C1 365 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 JADE2Q9NQC1 790 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms