RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 CAPNS1P04632 268 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 ITGB3P05106 788 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 FGRP09769 529 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 LTBRP36941 435 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 PPP2R2AP63151 447 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 KCNAB2Q13303 367 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 LSAMPQ13449 338 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 FXNQ16595 210 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 ZXDCQ2QGD7 858 aaPredicted RBP4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 SLC10A6Q3KNW5 377 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 PHF19Q5T6S3 580 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 STEAP3Q658P3 488 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 LIMS2Q7Z4I7 341 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 ZC3H18Q86VM9 953 aaKnown RBP4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 MCF2L2Q86YR7 1114 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 RBM12BQ8IXT5 1001 aaKnown RBP4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 GPR20Q99678 358 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 COA3Q9Y2R0 106 aaPredicted RBP4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 MROH6A6NGR9 719 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 TADA3O75528 432 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 LRG1P02750 347 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 DNAJA1P31689 397 aaKnown RBP4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 MAGEA10P43363 369 aaPredicted RBP4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 GTF2A2P52657 109 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 MLLT6P55198 1093 aaPredicted RBP4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 NKX3-2P78367 333 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 ZNF827Q17R98 1081 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 SLC35F1Q5T1Q4 408 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 ACBD5Q5T8D3 534 aaPredicted RBP4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 PRAMEF18Q5VWM3 479 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 TMC5Q6UXY8 1006 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 TTLL6Q8N841 843 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 LOXL4Q96JB6 756 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 TINF2Q9BSI4 451 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 IER2Q9BTL4 223 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 CDIP1Q9H305 208 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 SMPD4Q9NXE4 827 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 DTLQ9NZJ0 730 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 CROTQ9UKG9 612 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 PCDHB4Q9Y5E5 795 aa4.1□□□□□ -1.75
SUB1P3-201ENST00000564581 BLACEA4D250 179 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 H7BY64 318 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 DLX3O60479 287 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 PLATP00750 562 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 TCF3P15923 654 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 IL13P35225 146 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 ADAM17P78536 824 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 GRIN1Q05586 938 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 TESK1Q15569 626 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 TEPPQ6URK8 271 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 USP53Q70EK8 1073 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 EEPD1Q7L9B9 569 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 TOE1Q96GM8 510 aaKnown RBP4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 CCDC140Q96MF4 163 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 C8orf49Q96NF6 230 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 MYOTQ9UBF9 498 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 ST6GALNAC2Q9UJ37 374 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 ZNF652Q9Y2D9 606 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 NPFFR2Q9Y5X5 522 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 ZNF536O15090 1300 aa4.09□□□□□ -1.75
SUB1P3-201ENST00000564581 SLC27A2O14975 620 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 B4GALT3O60512 393 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 DGKIO75912 1065 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 LTFP02788 710 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 CYP1A1P04798 512 aaPredicted RBP4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 COL6A2P12110 1019 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 ZNF28P17035 718 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 ARID5AQ03989 594 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 KIAA2012Q0VF49 1180 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 GNL2Q13823 731 aaKnown RBP4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 EMC4Q5J8M3 183 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 FAM26FQ5R3K3 315 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 KCNT2Q6UVM3 1135 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 ANKS3Q6ZW76 656 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 LGI4Q8N135 537 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 PIP4K2CQ8TBX8 421 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 CLEC4DQ8WXI8 215 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 LCORQ96JN0 433 aaPredicted RBP4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 PTPN18Q99952 460 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 TMPRSS5Q9H3S3 457 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 PCDH18Q9HCL0 1135 aa4.08□□□□□ -1.76
SUB1P3-201ENST00000564581 NTRK3Q16288 839 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 PROSER1Q86XN7 944 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 ZCCHC14Q8WYQ9 949 aaKnown RBP4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 KCTD13Q8WZ19 329 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 MBD6Q96DN6 1003 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 KCNJ15Q99712 375 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 PHF20Q9BVI0 1012 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 EPB41L1Q9H4G0 881 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 L2HGDHQ9H9P8 463 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 ASH2LQ9UBL3 628 aa4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 R3HCC1Q9Y3T6 440 aaKnown RBP4.07□□□□□ -1.76
SUB1P3-201ENST00000564581 AGRPO00253 132 aa4.06□□□□□ -1.76
SUB1P3-201ENST00000564581 PRODHO43272 600 aa4.06□□□□□ -1.76
SUB1P3-201ENST00000564581 KLF4O43474 513 aa4.06□□□□□ -1.76
SUB1P3-201ENST00000564581 ZNF20P17024 532 aa4.06□□□□□ -1.76
SUB1P3-201ENST00000564581 MAP4K2Q12851 820 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms