RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NLGN1Q8N2Q7 840 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 ZBTB38Q8NAP3 1195 aaPredicted RBP7.48□□□□□ -1.21
UBR1-205ENST00000564540 TP53I13Q8NBR0 393 aaPredicted RBP7.48□□□□□ -1.21
UBR1-205ENST00000564540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBR1-205ENST00000564540 CDC6Q99741 560 aa7.48□□□□□ -1.21
UBR1-205ENST00000564540 HGSO14964 777 aaPredicted RBP7.47□□□□□ -1.21
UBR1-205ENST00000564540 INHBBP09529 407 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 STAT5AP42229 794 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 VWA3BQ502W6 1294 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 STYK1Q6J9G0 422 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 MIB1Q86YT6 1006 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
UBR1-205ENST00000564540 ZNF526Q8TF50 670 aaPredicted RBP7.47□□□□□ -1.21
UBR1-205ENST00000564540 SREK1Q8WXA9 508 aaKnown RBP7.47□□□□□ -1.21
UBR1-205ENST00000564540 EPB41L1Q9H4G0 881 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 TRAF6Q9Y4K3 522 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 KDM2BQ8NHM5 1336 aa7.47□□□□□ -1.21
UBR1-205ENST00000564540 A0A1B0GTL3 188 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 CYP2C8P10632 490 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 CD300LDQ6UXZ3 194 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 SCUBE1Q8IWY4 988 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 SYT8Q8NBV8 401 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 ARRDC4Q8NCT1 418 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 EXOC2Q96KP1 924 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 KCNC2Q96PR1 638 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 SRPK1Q96SB4 655 aaKnown RBP7.46□□□□□ -1.22
UBR1-205ENST00000564540 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 GORASP1Q9BQQ3 440 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 ZCCHC4Q9H5U6 513 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 ZNF652Q9Y2D9 606 aa7.46□□□□□ -1.22
UBR1-205ENST00000564540 TRBV23-1A0A0A0MS06 115 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 TCRBV5S2A0A599 114 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 TADA3O75528 432 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 GRK2P25098 689 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 GRK3P35626 688 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 GPR85P60893 370 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 DLX2Q07687 328 aaPredicted RBP7.45□□□□□ -1.22
UBR1-205ENST00000564540 SMAD4Q13485 552 aaKnown RBP7.45□□□□□ -1.22
UBR1-205ENST00000564540 CHRNA2Q15822 529 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 EMC4Q5J8M3 183 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 SAPCD2Q86UD0 394 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 STK32CQ86UX6 486 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 FAM126BQ8IXS8 530 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 PIP4K2CQ8TBX8 421 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 ZBTB8AQ96BR9 441 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 KCNJ15Q99712 375 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 PARD6AQ9NPB6 346 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 PCDHB4Q9Y5E5 795 aa7.45□□□□□ -1.22
UBR1-205ENST00000564540 KIZQ2M2Z5 673 aa7.44□□□□□ -1.22
UBR1-205ENST00000564540 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
UBR1-205ENST00000564540 IFNL3Q8IZI9 196 aa7.44□□□□□ -1.22
UBR1-205ENST00000564540 ZFYVE21Q9BQ24 234 aa7.44□□□□□ -1.22
UBR1-205ENST00000564540 MYOTQ9UBF9 498 aa7.44□□□□□ -1.22
UBR1-205ENST00000564540 C6orf222P0C671 652 aaPredicted RBP7.43□□□□□ -1.22
UBR1-205ENST00000564540 COL6A2P12110 1019 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 CTSWP56202 376 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 SUMO1P63165 101 aaKnown RBP7.43□□□□□ -1.22
UBR1-205ENST00000564540 CAP1Q01518 475 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 CR1LQ2VPA4 569 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 SOGA3Q5TF21 947 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 NPM2Q86SE8 214 aaKnown RBP7.43□□□□□ -1.22
UBR1-205ENST00000564540 RBM12BQ8IXT5 1001 aaKnown RBP7.43□□□□□ -1.22
UBR1-205ENST00000564540 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.43□□□□□ -1.22
UBR1-205ENST00000564540 FEZF2Q8TBJ5 459 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 YIPF4Q9BSR8 244 aa7.43□□□□□ -1.22
UBR1-205ENST00000564540 SPATA6Q9NWH7 488 aaPredicted RBP7.43□□□□□ -1.22
UBR1-205ENST00000564540 SOD2P04179 222 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 HOXA5P20719 270 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 LIPIQ6XZB0 460 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 ZC3H18Q86VM9 953 aaKnown RBP7.42□□□□□ -1.22
UBR1-205ENST00000564540 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 MKL1Q969V6 931 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 IPO9Q96P70 1041 aaKnown RBP7.42□□□□□ -1.22
UBR1-205ENST00000564540 C11orf84Q9BUA3 381 aaPredicted RBP7.42□□□□□ -1.22
UBR1-205ENST00000564540 SMOC1Q9H4F8 434 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 IPPKQ9H8X2 491 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 SLC6A20Q9NP91 592 aa7.42□□□□□ -1.22
UBR1-205ENST00000564540 MRPS23Q9Y3D9 190 aaKnown RBP7.42□□□□□ -1.22
UBR1-205ENST00000564540 OTOL1A6NHN0 477 aaPredicted RBP7.41□□□□□ -1.22
UBR1-205ENST00000564540 KRIT1O00522 736 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 SLC27A2O14975 620 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 NKRFO15226 690 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBR1-205ENST00000564540 SLURP1P55000 103 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 OTOP3Q7RTS5 596 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 PTPRN2Q92932 1015 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 TOE1Q96GM8 510 aaKnown RBP7.41□□□□□ -1.22
UBR1-205ENST00000564540 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 DHRS4Q9BTZ2 278 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 XYLT2Q9H1B5 865 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 OSBPL2Q9H1P3 480 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 DTLQ9NZJ0 730 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 ASH2LQ9UBL3 628 aa7.41□□□□□ -1.22
UBR1-205ENST00000564540 SH3D21A4FU49 640 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 SASH1O94885 1247 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 GNAT1P11488 350 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 ITGA1P56199 1179 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 DPH6Q7L8W6 267 aa7.4□□□□□ -1.22
UBR1-205ENST00000564540 MAMDC2Q7Z304 686 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms