RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 HSDL1Q3SXM5 330 aa22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 PSRC1Q6PGN9 363 aaPredicted RBP22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 BLOC1S2Q6QNY1 142 aa22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 Q6ZUG5 572 aa22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 FAM161BQ96MY7 647 aa22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 BCAS3Q9H6U6 928 aa22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 FAM217BQ9NTX9 383 aaPredicted RBP22.98■■□□□ 1.27
SHCBP1-203ENST00000564272 TGFB3P10600 412 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 HOXD8P13378 290 aaPredicted RBP22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 CDC27P30260 824 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 PSEN2P49810 448 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 GNPTABQ3T906 1256 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 PCNX4Q63HM2 1172 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 FAM109BQ6ICB4 259 aaPredicted RBP22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 BRF1Q92994 677 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 ALG1Q9BT22 464 aa22.97■■□□□ 1.27
SHCBP1-203ENST00000564272 DOCK5Q9H7D0 1870 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 STAM2O75886 525 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 F2P00734 622 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 ICAM3P32942 547 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 MFSD10Q14728 455 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 ZNF697Q5TEC3 545 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 GDF6Q6KF10 455 aaPredicted RBP22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 TYW1BQ6NUM6 668 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 MLXIPQ9HAP2 919 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 NOD1Q9Y239 953 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 TANC1Q9C0D5 1861 aa22.96■■□□□ 1.27
SHCBP1-203ENST00000564272 SPATA31C2B4DYI2 1134 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 FIBPO43427 364 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 RPS6KB1P23443 525 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 METAP2P50579 478 aaKnown RBP eCLIP22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 RCAN1P53805 252 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 SCN5AQ14524 2016 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 PTGISQ16647 500 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 RASIP1Q5U651 963 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 SESTD1Q86VW0 696 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 CTAGE1Q96RT6 745 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 KATNAL1Q9BW62 490 aa22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 V9GY48 417 aaPredicted RBP22.95■■□□□ 1.26
SHCBP1-203ENST00000564272 HAS3O00219 553 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 NAPAP54920 295 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 KIAA0753Q2KHM9 967 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 XRRA1Q6P2D8 792 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 VWCEQ96DN2 955 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 GUCD1Q96NT3 240 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 CXXC1Q9P0U4 656 aaPredicted RBP22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 HDAC6Q9UBN7 1215 aa22.94■■□□□ 1.26
SHCBP1-203ENST00000564272 SPDYE3A6NKU9 549 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 PPFIA4O75335 1185 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 FGBP02675 491 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 ADD1P35611 737 aaKnown RBP22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 METTL7BQ6UX53 244 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 CYFIP1Q7L576 1253 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 C7orf31Q8N865 590 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 HERVK_113Q902F9 699 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 GTF2IRD1Q9UHL9 959 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 PCDHA6Q9UN73 950 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 TELO2Q9Y4R8 837 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 PCDHA8Q9Y5H6 950 aa22.93■■□□□ 1.26
SHCBP1-203ENST00000564272 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 GRXCR1A8MXD5 290 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 STXBP3O00186 592 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 PSMA5P28066 241 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 NEDD9Q14511 834 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 PPP1R18Q6NYC8 613 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 OTOP2Q7RTS6 562 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 DEFB128Q7Z7B8 93 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 NLRX1Q86UT6 975 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 DHX38Q92620 1227 aaKnown RBP22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 C16orf70Q9BSU1 422 aa22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 TTYH1Q9H313 450 aaPredicted RBP22.92■■□□□ 1.26
SHCBP1-203ENST00000564272 NID2Q14112 1375 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 PITPNM1O00562 1244 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 NOP56O00567 594 aaKnown RBP22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 LGALS2P05162 132 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 ITGB5P18084 799 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 ADCY7P51828 1080 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 SP4Q02446 784 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 RETREG2Q8NC44 543 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 PGBD1Q96JS3 809 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 USP26Q9BXU7 913 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 AGXT2Q9BYV1 514 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 RIC8AQ9NPQ8 531 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 BARHL2Q9NY43 387 aa22.91■■□□□ 1.26
SHCBP1-203ENST00000564272 hCG_1984214I3L0E3 225 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 EPB41L2O43491 1005 aaKnown RBP22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 IQCF3P0C7M6 154 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 DNAJB2P25686 324 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 BFSP2Q13515 415 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 RPUSD2Q8IZ73 545 aaKnown RBP22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 FBXL16Q8N461 479 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 ZNF713Q8N859 430 aaPredicted RBP22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 GPRASP2Q96D09 838 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 GPR20Q99678 358 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 SEMA6BQ9H3T3 888 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 STXBP5LQ9Y2K9 1186 aa22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 TRIP12Q14669 1992 aaPredicted RBP22.9■■□□□ 1.26
SHCBP1-203ENST00000564272 CCDC196A0A1B0GTZ2 297 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms