RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SOWAHBA6NEL2 793 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 MSH4O15457 936 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 EDIL3O43854 480 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 GAS7O60861 476 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 GADD45BO75293 160 aaPredicted RBP14.46□□□□□ -0.09
CLK3-214ENST00000564096 ITGB5P18084 799 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 MRPS9P82933 396 aaKnown RBP14.46□□□□□ -0.09
CLK3-214ENST00000564096 HTRA3P83110 453 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 LACTBP83111 547 aaPredicted RBP14.46□□□□□ -0.09
CLK3-214ENST00000564096 FAM160A1Q05DH4 1040 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 ZNF792Q3KQV3 632 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 LRCH2Q5VUJ6 765 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 RESP18Q5W5W9 173 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 CLIC6Q96NY7 704 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 RIT2Q99578 217 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 TEKT3Q9BXF9 490 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 TTC12Q9H892 705 aaPredicted RBP14.46□□□□□ -0.09
CLK3-214ENST00000564096 DDX19AQ9NUU7 478 aaKnown RBP14.46□□□□□ -0.09
CLK3-214ENST00000564096 RNF186Q9NXI6 227 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 PCDHA12Q9UN75 941 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 MRVI1Q9Y6F6 885 aa14.46□□□□□ -0.09
CLK3-214ENST00000564096 IPO5O00410 1097 aaKnown RBP14.45□□□□□ -0.1
CLK3-214ENST00000564096 SLC26A4O43511 780 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 TRAK2O60296 914 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 KINO60870 393 aaKnown RBP14.45□□□□□ -0.1
CLK3-214ENST00000564096 PFKFB1P16118 471 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 UBA7P41226 1012 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 TECP42680 631 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 SP3Q02447 781 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 MAP2K1Q02750 393 aaPredicted RBP14.45□□□□□ -0.1
CLK3-214ENST00000564096 MAP2K5Q13163 448 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 ARHGEF6Q15052 776 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 MORN1Q5T089 497 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 KRT79Q5XKE5 535 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 KCNV1Q6PIU1 500 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 SYMPKQ92797 1274 aaKnown RBP14.45□□□□□ -0.1
CLK3-214ENST00000564096 HAS1Q92839 578 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 SLC5A5Q92911 643 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 KCNH7Q9NS40 1196 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 TBC1D22BQ9NU19 505 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 LRWD1Q9UFC0 647 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 CCDC39Q9UFE4 941 aa14.45□□□□□ -0.1
CLK3-214ENST00000564096 SMCHD1A6NHR9 2005 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 ASTN1O14525 1302 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 SYNGAP1Q96PV0 1343 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 KDM3AQ9Y4C1 1321 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 TRPA1O75762 1119 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 HOXC6P09630 235 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 PDIA5Q14554 519 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 ARMCX2Q7L311 632 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 IGSF22Q8N9C0 903 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 GIMAP8Q8ND71 665 aaPredicted RBP14.44□□□□□ -0.1
CLK3-214ENST00000564096 CYP2W1Q8TAV3 490 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 MORC4Q8TE76 937 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 CDK5RAP3Q96JB5 506 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 FGD4Q96M96 766 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 R3HDMLQ9H3Y0 253 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 AGO4Q9HCK5 861 aaKnown RBP14.44□□□□□ -0.1
CLK3-214ENST00000564096 VTA1Q9NP79 307 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 LCTP09848 1927 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
CLK3-214ENST00000564096 FAM237AA0A1B0GTK4 181 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 COBLO75128 1261 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 TBC1D8O95759 1140 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 ICAM3P32942 547 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 SYKP43405 635 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 PSMC4P43686 418 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 KRT76Q01546 638 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 GRIN1Q05586 938 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 PPP2R5CQ13362 524 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 NCAPH2Q6IBW4 605 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 CALML4Q96GE6 196 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 MAML3Q96JK9 1138 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 ANP32EQ9BTT0 268 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 GOLPH3LQ9H4A5 285 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 USP25Q9UHP3 1055 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 HOOK1Q9UJC3 728 aaKnown RBP14.43□□□□□ -0.1
CLK3-214ENST00000564096 KCNH3Q9ULD8 1083 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 HPSEQ9Y251 543 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 TCHHQ07283 1943 aa14.43□□□□□ -0.1
CLK3-214ENST00000564096 NFASCO94856 1347 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 A0A1B0GVL5 298 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 POTEMA6NI47 508 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 PSMD10O75832 226 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 GNRH1P01148 92 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 ARP10275 920 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 TGFB3P10600 412 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 HOXD10P28358 340 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 NDUFA8P51970 172 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 IRF5Q13568 498 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 IL17AQ16552 155 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 SPECC1Q5M775 1068 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 CCDC183Q5T5S1 534 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 OLFML2BQ68BL8 750 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 MAMDC4Q6UXC1 1216 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 SEPT14Q6ZU15 432 aa14.42□□□□□ -0.1
CLK3-214ENST00000564096 CABP7Q86V35 215 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms