RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 PXMP2Q9NR77 195 aa21.56■■□□□ 1.04
SYNGR3-203ENST00000563869 PQBP1O60828 265 aaKnown RBP21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 ZNF865P0CJ78 1059 aaPredicted RBP21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 AKR1A1P14550 325 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 CCND2P30279 289 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 CLK2P49760 499 aaKnown RBP21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 FPGSQ05932 587 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 GNPTABQ3T906 1256 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 LARP1BQ659C4 914 aaKnown RBP21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 FCHSD1Q86WN1 690 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 CDHR1Q96JP9 859 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 TSEN34Q9BSV6 310 aaKnown RBP21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 FOXP1Q9H334 677 aaPredicted RBP21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 TMEM39AQ9NV64 488 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 PRUNE2Q8WUY3 3088 aa21.55■■□□□ 1.04
SYNGR3-203ENST00000563869 CCDC194A0A1B0GVG4 234 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 MAFGO15525 162 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 ADAMTS4O75173 837 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 EIF3JO75822 258 aaKnown RBP21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 TAL1P17542 331 aaPredicted RBP21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 HOXA13P31271 388 aaPredicted RBP21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 PCNX4Q63HM2 1172 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 KRT40Q6A162 431 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 TYW1BQ6NUM6 668 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 USP17L6PQ6QN14 398 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 ANKRD33Q7Z3H0 272 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 TOX2Q96NM4 488 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 PCDHA6Q9UN73 950 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 PCDHA8Q9Y5H6 950 aa21.54■■□□□ 1.04
SYNGR3-203ENST00000563869 MYH7BA7E2Y1 1941 aa21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 EDNRBP24530 442 aa21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 USP11P51784 963 aa21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 CNTN2Q02246 1040 aa21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 ARMCX2Q7L311 632 aa21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 ANO3Q9BYT9 981 aa21.53■■□□□ 1.04
SYNGR3-203ENST00000563869 SOWAHBA6NEL2 793 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 NR3C2P08235 984 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 SREBF1P36956 1147 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 FAAP100Q0VG06 881 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 GRIN2CQ14957 1233 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 NONOQ15233 471 aaKnown RBP eCLIP21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 PDCD2LQ9BRP1 358 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 STARD7Q9NQZ5 370 aa21.52■■□□□ 1.04
SYNGR3-203ENST00000563869 DCDC2CA8MYV0 355 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 PPFIA3O75145 1194 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 TGFB3P10600 412 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 DNAJB2P25686 324 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 ACLYP53396 1101 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 PGM5Q15124 567 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 NLRX1Q86UT6 975 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 VSIG10LQ86VR7 867 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 TBC1D5Q92609 795 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 TAAR1Q96RJ0 339 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 LRRC37A2A6NM11 1700 aa21.51■■□□□ 1.03
SYNGR3-203ENST00000563869 MOXD2PA6NHM9 499 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 NKRFO15226 690 aaKnown RBP eCLIP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 CYP3A4P08684 503 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 GCFC2P16383 781 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 SETQ01105 290 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 ORC2Q13416 577 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 MOXD1Q6UVY6 613 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 NIPA1Q7RTP0 329 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 DIS3L2Q8IYB7 885 aaKnown RBP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 GIMAP8Q8ND71 665 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 KLHDC9Q8NEP7 349 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 SCFD2Q8WU76 684 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 LENG1Q96BZ8 264 aaPredicted RBP21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 SYNRGQ9UMZ2 1314 aa21.5■■□□□ 1.03
SYNGR3-203ENST00000563869 M0R2N6 131 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 TIMP1P01033 207 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 EIF2AK2P19525 551 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 TRAPPC10P48553 1259 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 UBE2SQ16763 222 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 TJAP1Q5JTD0 557 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 JAKMIP3Q5VZ66 844 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 ZNF576Q9H609 170 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 COL20A1Q9P218 1284 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 FAM184BQ9ULE4 1060 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 NOL7Q9UMY1 257 aaKnown RBP21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 KCNJ14Q9UNX9 436 aa21.49■■□□□ 1.03
SYNGR3-203ENST00000563869 ZNF76P36508 570 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 ARHGAP4P98171 946 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 ACVR2BQ13705 512 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 TTLL4Q14679 1199 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 IQSEC1Q6DN90 963 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 CCSAPQ6IQ19 270 aaPredicted RBP21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 BRAPQ7Z569 592 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 USP38Q8NB14 1042 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 GPRASP2Q96D09 838 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 FGD4Q96M96 766 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 TBX21Q9UL17 535 aa21.48■■□□□ 1.03
SYNGR3-203ENST00000563869 SNAI1O95863 264 aaPredicted RBP21.47■■□□□ 1.03
SYNGR3-203ENST00000563869 U2AF2P26368 475 aaKnown RBP eCLIP21.47■■□□□ 1.03
SYNGR3-203ENST00000563869 KCNA10Q16322 511 aa21.47■■□□□ 1.03
SYNGR3-203ENST00000563869 MFSD5Q6N075 450 aa21.47■■□□□ 1.03
SYNGR3-203ENST00000563869 TIFAQ96CG3 184 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms