RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 PHKA1P46020 1223 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 CPT1AP50416 773 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 GSTO1P78417 241 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 FOXC1Q12948 553 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 DUSP6Q16828 381 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 CERKLQ49MI3 558 aaPredicted RBP13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 APOL5Q9BWW9 433 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 CDH22Q9UJ99 828 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 USTQ9Y2C2 406 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
HDGFL3-204ENST00000563790 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 PER2O15055 1255 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 RETP07949 1114 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 GLULP15104 373 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 TECP42680 631 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 ZNF605Q86T29 641 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 SPATA18Q8TC71 538 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 STK31Q9BXU1 1019 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 CACNA1EQ15878 2313 aa13.13□□□□□ -0.31
HDGFL3-204ENST00000563790 ITPR2Q14571 2701 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 LOXHD1Q8IVV2 1947 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 J3QKU1 62 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 PRB1P04280 392 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 RASGRF1Q13972 1273 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 PLEKHG4Q58EX7 1191 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 PROSER1Q86XN7 944 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 KAZALD1Q96I82 304 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
HDGFL3-204ENST00000563790 WDR46O15213 610 aaKnown RBP13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 SEPT2Q15019 361 aa13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 PSAPL1Q6NUJ1 521 aa13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 SCNM1Q9BWG6 230 aa13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
HDGFL3-204ENST00000563790 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 ZNF618Q5T7W0 954 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 SNRNP48Q6IEG0 339 aaKnown RBP13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 RASGRP4Q8TDF6 673 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 RAB23Q9ULC3 237 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 PPP1R9AQ9ULJ8 1098 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 MGAQ8IWI9 3026 aa13.1□□□□□ -0.31
HDGFL3-204ENST00000563790 ASCC3Q8N3C0 2202 aaKnown RBP13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 ASB14A6NK59 587 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 E9PSI1 815 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 TK2O00142 265 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 KPNA6O60684 536 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 TOP3BO95985 862 aaKnown RBP13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 MMP3P08254 477 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 PLCG2P16885 1265 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 ITIH3Q06033 890 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 FLIIQ13045 1269 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 TRIM71Q2Q1W2 868 aaKnown RBP13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 ANKRD35Q8N283 1001 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 EHD4Q9H223 541 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 CLMPQ9H6B4 373 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
HDGFL3-204ENST00000563790 MYH15Q9Y2K3 1946 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 CFHP08603 1231 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 MTHFRP42898 656 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 FKBP5Q13451 457 aaPredicted RBP13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 RABL6Q3YEC7 729 aaPredicted RBP13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 BEND3Q5T5X7 828 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 KLHL23Q8NBE8 558 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 PJA1Q8NG27 643 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
HDGFL3-204ENST00000563790 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 EOMESO95936 686 aa13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 CAPNS1P04632 268 aa13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 ATP2B3Q16720 1220 aa13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
HDGFL3-204ENST00000563790 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms