RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 KLF15Q9UIH9 416 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 PRR12Q9ULL5 1215 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 MYH1P12882 1939 aa6.11□□□□□ -1.43
HERPUD1-207ENST00000563781 TSPY2A6NKD2 308 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TREHO43280 583 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 NMT2O60551 498 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ASNSP08243 561 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 PTPRAP18433 802 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 EXOSC10Q01780 885 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 SEC23AQ15436 765 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ABCB5Q2M3G0 1257 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ZNF468Q5VIY5 522 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 LYPD4Q6UWN0 246 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TMEM179Q6ZVK1 233 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 SAPCD2Q86UD0 394 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ZNF444Q8N0Y2 327 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 NCOA7Q8NI08 942 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ACER1Q8TDN7 264 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ESR2Q92731 530 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 CEP95Q96GE4 821 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TCEANC2Q96MN5 208 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 NEK1Q96PY6 1258 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 CITED4Q96RK1 184 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 OXCT2Q9BYC2 517 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TANGO6Q9C0B7 1094 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ELP3Q9H9T3 547 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 UPF2Q9HAU5 1272 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 ZNF287Q9HBT7 754 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TOMM22Q9NS69 142 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 GINM1Q9NU53 330 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TCP11L1Q9NUJ3 509 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 MTMR4Q9NYA4 1195 aa6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 TMA7Q9Y2S6 64 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-207ENST00000563781 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 GREB1LQ9C091 1923 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TNKSO95271 1327 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 WDR19Q8NEZ3 1342 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 A0A1W2PRG0 241 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 MPHOSPH10O00566 681 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 SH2B2O14492 632 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 PRC1O43663 620 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 FZD6O60353 706 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 XYLBO75191 536 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TSPY3P0CV98 308 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TSPY8P0CW00 308 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 CASTP20810 708 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 RPS6KB1P23443 525 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 MZF1P28698 734 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 HUNKP57058 714 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 PCBP4P57723 403 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 ICA1Q05084 483 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TRDNQ13061 729 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TRIP4Q15650 581 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 BLOC1S2Q6QNY1 142 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 C1orf229Q6ZS94 237 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 DHX32Q7L7V1 743 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 CHST3Q7LGC8 479 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TMC7Q7Z402 723 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 RAB44Q7Z6P3 723 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 RALYLQ86SE5 291 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 SYT9Q86SS6 491 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 NT5DC4Q86YG4 428 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 RASAL3Q86YV0 1011 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 ENAHQ8N8S7 591 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 IGDCC4Q8TDY8 1250 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 WHAMMQ8TF30 809 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 EDEM1Q92611 657 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 ANKS1AQ92625 1134 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 WNK4Q96J92 1243 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TTC14Q96N46 770 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 MTA3Q9BTC8 594 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 WDR18Q9BV38 432 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 LRRC2Q9BYS8 371 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 AGXT2Q9BYV1 514 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 UPF3BQ9BZI7 483 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 CWC22Q9HCG8 908 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 CABP5Q9NP86 173 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 NYAP2Q9P242 653 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 GDF2Q9UK05 429 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 BRPF3Q9ULD4 1205 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 CSADQ9Y600 493 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 OTOFQ9HC10 1997 aa6.09□□□□□ -1.43
HERPUD1-207ENST00000563781 TLDC2A0PJX2 215 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 RASSF10A6NK89 507 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 FAM155AB1AL88 458 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 SIN3BO75182 1162 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PRPF40AO75400 957 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 SASH3O75995 380 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PDGFAP04085 211 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 CELA2BP08218 269 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 EEF2P13639 858 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 TARSP26639 723 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 PSMA5P28066 241 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 ADH6P28332 368 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 MCM5P33992 734 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 ECE1P42892 770 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 HTRA3P83110 453 aa6.08□□□□□ -1.44
HERPUD1-207ENST00000563781 FANCCQ00597 558 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms