RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
RNF40-204ENST00000563683 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
RNF40-204ENST00000563683 DDX12PQ92771 950 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 LGALS16A8MUM7 142 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
RNF40-204ENST00000563683 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
RNF40-204ENST00000563683 PSEN1P49768 467 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 PKN1Q16512 942 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 WDR78Q5VTH9 848 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 ARHGEF10LQ9HCE6 1279 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 HDAC6Q9UBN7 1215 aa11.49□□□□□ -0.57
RNF40-204ENST00000563683 CAMTA1Q9Y6Y1 1673 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 ARHGAP44Q17R89 818 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 KAT2BQ92831 832 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 MAGEF1Q9HAY2 307 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 ANAPC4Q9UJX5 808 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 CAPN7Q9Y6W3 813 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 BCL9O00512 1426 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 PPIP5K2O43314 1243 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 MYL1P05976 194 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 MAN2A1Q16706 1144 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 CFAP221Q4G0U5 840 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 LMBR1Q8WVP7 490 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 QTRT2Q9H974 415 aaKnown RBP11.48□□□□□ -0.57
RNF40-204ENST00000563683 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
RNF40-204ENST00000563683 USP54Q70EL1 1684 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 KDM3AQ9Y4C1 1321 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 GSTTP1A0A1W2PQM5 241 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 ANO9A1A5B4 782 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 ARHGEF35A5YM69 484 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 LRRC10BA6NIK2 292 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 CALUO43852 315 aaPredicted RBP11.48□□□□□ -0.57
RNF40-204ENST00000563683 EXOC3O60645 756 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
RNF40-204ENST00000563683 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
RNF40-204ENST00000563683 NR2F2P24468 414 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 CYP2J2P51589 502 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 TNNC1P63316 161 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 EVX2Q03828 476 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 EHHADHQ08426 723 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 FBXW10Q5XX13 1052 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 DCCP43146 1447 aa11.48□□□□□ -0.57
RNF40-204ENST00000563683 CLRN2A0PK11 232 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 SMIM23A6NLE4 172 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 MOCS3O95396 460 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 AKR1B1P15121 316 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ABCB4P21439 1286 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 STK4Q13043 487 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ALS2CLQ60I27 953 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 PRPF38AQ8NAV1 312 aaKnown RBP11.47□□□□□ -0.57
RNF40-204ENST00000563683 NEDD1Q8NHV4 660 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 DYDC1Q8WWB3 177 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 AMNQ9BXJ7 453 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 HOXA13P31271 388 aaPredicted RBP11.47□□□□□ -0.57
RNF40-204ENST00000563683 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 TTBK2Q6IQ55 1244 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 LARGE2Q8N3Y3 721 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 STK17AQ9UEE5 414 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ZC3H4Q9UPT8 1303 aaKnown RBP11.47□□□□□ -0.57
RNF40-204ENST00000563683 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 CLIC2O15247 247 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 GAS7O60861 476 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ATP2C2O75185 946 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 HPDP32754 393 aaPredicted RBP11.47□□□□□ -0.57
RNF40-204ENST00000563683 RPS6KA1Q15418 735 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 VWA3BQ502W6 1294 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ANKRD40Q6AI12 368 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.47□□□□□ -0.57
RNF40-204ENST00000563683 TRIM10Q9UDY6 481 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 TFR2Q9UP52 801 aa11.47□□□□□ -0.57
RNF40-204ENST00000563683 PNMA6FA0A0J9YX94 578 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 AGPSO00116 658 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 KCNK3O14649 394 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 ABL1P00519 1130 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 ATP1A1P05023 1023 aaKnown RBP11.46□□□□□ -0.57
RNF40-204ENST00000563683 MYCLP12524 364 aaPredicted RBP11.46□□□□□ -0.57
RNF40-204ENST00000563683 RASA1P20936 1047 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 TNFAIP3P21580 790 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 PDE6BP35913 854 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 DDR1Q08345 913 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 NLGN1Q8N2Q7 840 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 RETREG2Q8NC44 543 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 CCDC17Q96LX7 622 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 RIC1Q4ADV7 1423 aa11.46□□□□□ -0.57
RNF40-204ENST00000563683 A0A087X0B3 334 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms