RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 FAN1Q9Y2M0 1017 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 ROCK2O75116 1388 aaKnown RBP4.5□□□□□ -1.69
LINC01416-201ENST00000563553 CASKIN1Q8WXD9 1431 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 PCF11O94913 1555 aaKnown RBP4.5□□□□□ -1.69
LINC01416-201ENST00000563553 FPR2P25090 351 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 DENND5AQ6IQ26 1287 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 C6orf15Q6UXA7 325 aaPredicted RBP4.5□□□□□ -1.69
LINC01416-201ENST00000563553 FERMT3Q86UX7 667 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 LNPKQ9C0E8 428 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 CYP26B1Q9NR63 512 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 MARCH2Q9P0N8 246 aa4.5□□□□□ -1.69
LINC01416-201ENST00000563553 FGD6Q6ZV73 1430 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 PLEKHH2Q8IVE3 1493 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 TRBV23OR9-2A0A075B6M9 112 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 ZNF143P52747 638 aaPredicted RBP4.49□□□□□ -1.69
LINC01416-201ENST00000563553 CABP7Q86V35 215 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 RGS22Q8NE09 1264 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 BTN2A2Q8WVV5 523 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 C1orf159Q96HA4 380 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 STRIP2Q9ULQ0 834 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 KIF21AQ7Z4S6 1674 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 PRDM2Q13029 1718 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 NPHS1O60500 1241 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 SMAD4Q13485 552 aaKnown RBP4.49□□□□□ -1.69
LINC01416-201ENST00000563553 PRR31Q5SQ13 230 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 ZNF227Q86WZ6 799 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 ZBTB8AQ96BR9 441 aa4.49□□□□□ -1.69
LINC01416-201ENST00000563553 RBM15Q96T37 977 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC01416-201ENST00000563553 ISY1Q9ULR0 285 aaKnown RBP4.49□□□□□ -1.69
LINC01416-201ENST00000563553 FGD5Q6ZNL6 1462 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 ATAD2BQ9ULI0 1458 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 SMAD7O15105 426 aaKnown RBP4.48□□□□□ -1.69
LINC01416-201ENST00000563553 ZBTB7AO95365 584 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 SCG5P05408 212 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 ITGAVP06756 1048 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 PRSS53Q2L4Q9 553 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 CPLX3Q8WVH0 158 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 FRAT1Q92837 279 aaPredicted RBP4.48□□□□□ -1.69
LINC01416-201ENST00000563553 APBA2Q99767 749 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 NUDT5Q9UKK9 219 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 INPP5FQ9Y2H2 1132 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 MRVI1Q9Y6F6 885 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 LRPPRCP42704 1394 aaKnown RBP4.48□□□□□ -1.69
LINC01416-201ENST00000563553 NAIPQ13075 1403 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 SPATA31E1Q6ZUB1 1445 aa4.48□□□□□ -1.69
LINC01416-201ENST00000563553 TCOF1Q13428 1488 aaKnown RBP4.48□□□□□ -1.69
LINC01416-201ENST00000563553 HSPA5P11021 654 aaKnown RBP4.47□□□□□ -1.69
LINC01416-201ENST00000563553 THBS2P35442 1172 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 TESK1Q15569 626 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 HHIPL2Q6UWX4 724 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 SNX27Q96L92 541 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 C11orf84Q9BUA3 381 aaPredicted RBP4.47□□□□□ -1.69
LINC01416-201ENST00000563553 X6R8D5 127 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 EHBP1L1Q8N3D4 1523 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 C22orf46C9J442 243 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 HSP90AA1P07900 732 aaKnown RBP4.47□□□□□ -1.69
LINC01416-201ENST00000563553 ADRB1P08588 477 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 RRP1P56182 461 aaKnown RBP4.47□□□□□ -1.69
LINC01416-201ENST00000563553 ITGA1P56199 1179 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 NCAPHQ15003 741 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 CR1LQ2VPA4 569 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 POMZP3Q6PJE2 187 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 ADAMTS17Q8TE56 1095 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 CDIP1Q9H305 208 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 WASF3Q9UPY6 502 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 HMGXB3Q12766 1538 aa4.47□□□□□ -1.69
LINC01416-201ENST00000563553 BRD4O60885 1362 aaPredicted RBP4.46□□□□□ -1.69
LINC01416-201ENST00000563553 ZMYM3Q14202 1370 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 TPM2P07951 284 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 LCP1P13796 627 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 SLC6A11P48066 632 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 HSP90AA2PQ14568 343 aaPredicted RBP4.46□□□□□ -1.69
LINC01416-201ENST00000563553 STK32CQ86UX6 486 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 DCP2Q8IU60 420 aaKnown RBP4.46□□□□□ -1.69
LINC01416-201ENST00000563553 RIOX2Q8IUF8 465 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 USP33Q8TEY7 942 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 DDX1Q92499 740 aaKnown RBP4.46□□□□□ -1.69
LINC01416-201ENST00000563553 NTMQ9P121 344 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 PALD1Q9ULE6 856 aa4.46□□□□□ -1.69
LINC01416-201ENST00000563553 VIRMAQ69YN4 1812 aaKnown RBP4.46□□□□□ -1.7
LINC01416-201ENST00000563553 SUPT6HQ7KZ85 1726 aaKnown RBP4.46□□□□□ -1.7
LINC01416-201ENST00000563553 SUSD5O60279 629 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 CYP2C8P10632 490 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 CNR2P34972 360 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 ETFBP38117 255 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 GRIA2P42262 883 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 SARSP49591 514 aaKnown RBP4.46□□□□□ -1.7
LINC01416-201ENST00000563553 PLP2Q04941 152 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 ETV3LQ6ZN32 361 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 FAM178BQ8IXR5 827 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 RCBTB1Q8NDN9 531 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 SSBP3Q9BWW4 388 aaPredicted RBP4.46□□□□□ -1.7
LINC01416-201ENST00000563553 BTG4Q9NY30 223 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 PODXL2Q9NZ53 605 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 LAS1LQ9Y4W2 734 aaKnown RBP4.46□□□□□ -1.7
LINC01416-201ENST00000563553 RPRD2Q5VT52 1461 aaKnown RBP4.46□□□□□ -1.7
LINC01416-201ENST00000563553 SCAPERQ9BY12 1400 aa4.46□□□□□ -1.7
LINC01416-201ENST00000563553 DHX29Q7Z478 1369 aaKnown RBP4.45□□□□□ -1.7
LINC01416-201ENST00000563553 FGRP09769 529 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms