RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 TRIM68Q6AZZ1 485 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 SIGIRRQ6IA17 410 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 SLC38A6Q8IZM9 456 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 SPARTQ8N0X7 666 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 SPICE1Q8N0Z3 855 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 FTOQ9C0B1 505 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDH1-205ENST00000562836 CARD9Q9H257 536 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 ATP13A3Q9H7F0 1226 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 GDPD2Q9HCC8 539 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 PTPRHQ9HD43 1115 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 DMGDHQ9UI17 866 aaKnown RBP10.25□□□□□ -0.77
CDH1-205ENST00000562836 SERPINA10Q9UK55 444 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 TTC7AQ9ULT0 858 aaPredicted RBP10.25□□□□□ -0.77
CDH1-205ENST00000562836 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 PTPRGP23470 1445 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 H3BUI4 141 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 WDR46O15213 610 aaKnown RBP10.25□□□□□ -0.77
CDH1-205ENST00000562836 PER1O15534 1290 aaPredicted RBP10.25□□□□□ -0.77
CDH1-205ENST00000562836 PSMA3P25788 255 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 GNGT1P63211 74 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 OLFML2BQ68BL8 750 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 LRRTM3Q86VH5 581 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 TMTC1Q8IUR5 882 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
CDH1-205ENST00000562836 CCDC148Q8NFR7 591 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 PEX13Q92968 403 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 NSMCE3Q96MG7 304 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 TESK2Q96S53 571 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 HERC2P3Q9BVR0 1158 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 CALN1Q9BXU9 219 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 RIC8AQ9NPQ8 531 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 L1RE1Q9UN81 338 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 FADS3Q9Y5Q0 445 aa10.25□□□□□ -0.77
CDH1-205ENST00000562836 E9PCH4 1651 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
CDH1-205ENST00000562836 STRNO43815 780 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 IDEP14735 1019 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 ZNF16P17020 682 aaPredicted RBP10.24□□□□□ -0.77
CDH1-205ENST00000562836 ZNF75DP51815 510 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 CASP8Q14790 479 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 NR1D2Q14995 579 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 CYTH1Q15438 398 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 ARL13BQ3SXY8 428 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 METTL21CQ5VZV1 264 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 OTUD7BQ6GQQ9 843 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 MAEAQ7L5Y9 396 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 HOMER1Q86YM7 354 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 LSMEM2Q8N112 164 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 GOLPH3LQ9H4A5 285 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 RMND1Q9NWS8 449 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 STAP2Q9UGK3 403 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 ADGBQ8N7X0 1667 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 GNA14O95837 355 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
CDH1-205ENST00000562836 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
CDH1-205ENST00000562836 RBM18Q96H35 190 aaKnown RBP10.24□□□□□ -0.77
CDH1-205ENST00000562836 EHMT1Q9H9B1 1298 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 SCPEP1Q9HB40 452 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 AVENQ9NQS1 362 aaPredicted RBP10.24□□□□□ -0.77
CDH1-205ENST00000562836 KCND1Q9NSA2 647 aa10.24□□□□□ -0.77
CDH1-205ENST00000562836 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 NDC80O14777 642 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 MAGEB3O15480 346 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 FIBPO43427 364 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 ST18O60284 1047 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 PRPF6O94906 941 aaKnown RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 CYP2C9P11712 490 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 MX1P20591 662 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 NLRP5P59047 1200 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 MDM2Q00987 491 aaPredicted RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 PPP2R3AQ06190 1150 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 NIPAL4Q0D2K0 466 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 GRM1Q13255 1194 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 CLVS1Q8IUQ0 354 aaPredicted RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 NATD1Q8N6N6 113 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 SDCCAG3Q96C92 435 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 HIC2Q96JB3 615 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 CIB1Q99828 191 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 BHMT2Q9H2M3 363 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 HSFX1Q9UBD0 423 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 RNF113AO15541 343 aaKnown RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 LILRB3O75022 631 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 ATP9AO75110 1047 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
CDH1-205ENST00000562836 TXLNAP40222 546 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 RFC5P40937 340 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 CCNFP41002 786 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 UBA7P41226 1012 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 MTHFRP42898 656 aa10.23□□□□□ -0.77
CDH1-205ENST00000562836 EXOSC9Q06265 439 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms