RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHD9-206ENST00000562791 USP40Q9NVE5 1235 aa6.99□□□□□ -1.29
CHD9-206ENST00000562791 HGSO14964 777 aaPredicted RBP6.98□□□□□ -1.29
CHD9-206ENST00000562791 SMARCA5O60264 1052 aaPredicted RBP6.98□□□□□ -1.29
CHD9-206ENST00000562791 EIF5BO60841 1220 aaKnown RBP6.98□□□□□ -1.29
CHD9-206ENST00000562791 TADA3O75528 432 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 ADAM9Q13443 819 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 NTRK3Q16288 839 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 YOD1Q5VVQ6 348 aaPredicted RBP6.98□□□□□ -1.29
CHD9-206ENST00000562791 ZC3H18Q86VM9 953 aaKnown RBP6.98□□□□□ -1.29
CHD9-206ENST00000562791 ADAMTS17Q8TE56 1095 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 AARSD1Q9BTE6 412 aaKnown RBP6.98□□□□□ -1.29
CHD9-206ENST00000562791 BDH2Q9BUT1 245 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 PHF20Q9BVI0 1012 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 EPB41L1Q9H4G0 881 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 PCDHB4Q9Y5E5 795 aa6.98□□□□□ -1.29
CHD9-206ENST00000562791 CELA3BP08861 270 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 HSP90AA2PQ14568 343 aaPredicted RBP6.97□□□□□ -1.29
CHD9-206ENST00000562791 NAALADL2Q58DX5 795 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 PRR31Q5SQ13 230 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 KCNT2Q6UVM3 1135 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 TTLL7Q6ZT98 887 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 DDX1Q92499 740 aaKnown RBP6.97□□□□□ -1.29
CHD9-206ENST00000562791 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 SGSM3Q96HU1 749 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 JAM3Q9BX67 310 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 GPR27Q9NS67 375 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 DTLQ9NZJ0 730 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 WASF3Q9UPY6 502 aa6.97□□□□□ -1.29
CHD9-206ENST00000562791 BLACEA4D250 179 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 E9PSI1 815 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 PRODHO43272 600 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 DGKIO75912 1065 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 RPL13P26373 211 aaKnown RBP6.96□□□□□ -1.3
CHD9-206ENST00000562791 CNR2P34972 360 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 GJA9P57773 515 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 CHRNA2Q15822 529 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 ZFYVE27Q5T4F4 411 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 ST13P5Q8NFI4 369 aaPredicted RBP6.96□□□□□ -1.3
CHD9-206ENST00000562791 ZSWIM3Q96MP5 696 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 MYOTQ9UBF9 498 aa6.96□□□□□ -1.3
CHD9-206ENST00000562791 FGFR1P11362 822 aa6.95□□□□□ -1.3
CHD9-206ENST00000562791 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
CHD9-206ENST00000562791 UBXN11Q5T124 520 aa6.95□□□□□ -1.3
CHD9-206ENST00000562791 PIP4K2CQ8TBX8 421 aa6.95□□□□□ -1.3
CHD9-206ENST00000562791 PCDH18Q9HCL0 1135 aa6.95□□□□□ -1.3
CHD9-206ENST00000562791 PODXL2Q9NZ53 605 aa6.95□□□□□ -1.3
CHD9-206ENST00000562791 MSRB2Q9Y3D2 182 aa6.95□□□□□ -1.3
CHD9-206ENST00000562791 IQCA1LA6NCM1 817 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 LRG1P02750 347 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 PABPC1P11940 636 aaKnown RBP6.94□□□□□ -1.3
CHD9-206ENST00000562791 NKX3-2P78367 333 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 RGL3Q3MIN7 710 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 TEPPQ6URK8 271 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 RSPO2Q6UXX9 243 aaPredicted RBP6.94□□□□□ -1.3
CHD9-206ENST00000562791 SPATC1Q76KD6 591 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 TTLL6Q8N841 843 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 TOE1Q96GM8 510 aaKnown RBP6.94□□□□□ -1.3
CHD9-206ENST00000562791 TRIM55Q9BYV6 548 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 RBPJLQ9UBG7 517 aa6.94□□□□□ -1.3
CHD9-206ENST00000562791 STK10O94804 968 aaKnown RBP6.93□□□□□ -1.3
CHD9-206ENST00000562791 NFKB2Q00653 900 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 PLP2Q04941 152 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 MCTP2Q6DN12 878 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 PRRT2Q7Z6L0 340 aaPredicted RBP6.93□□□□□ -1.3
CHD9-206ENST00000562791 SLC6A20Q9NP91 592 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 ASH2LQ9UBL3 628 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
CHD9-206ENST00000562791 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 DDX3XO00571 662 aaKnown RBP eCLIP6.92□□□□□ -1.3
CHD9-206ENST00000562791 SLC27A2O14975 620 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 ZNF28P17035 718 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 GRK2P25098 689 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 GRK3P35626 688 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 STYK1Q6J9G0 422 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 LBX2Q6XYB7 198 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 RBM12BQ8IXT5 1001 aaKnown RBP6.92□□□□□ -1.3
CHD9-206ENST00000562791 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 LRRC47Q8N1G4 583 aaKnown RBP6.92□□□□□ -1.3
CHD9-206ENST00000562791 DCAF4Q8WV16 495 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 SMOC1Q9H4F8 434 aa6.92□□□□□ -1.3
CHD9-206ENST00000562791 NGRNQ9NPE2 291 aaKnown RBP6.92□□□□□ -1.3
CHD9-206ENST00000562791 ADCY3O60266 1144 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 LTFP02788 710 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 EFEMP1Q12805 493 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 FAM26FQ5R3K3 315 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 TMC5Q6UXY8 1006 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 OTOP3Q7RTS5 596 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 PROSER1Q86XN7 944 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 TXNDC5Q8NBS9 432 aaKnown RBP6.91□□□□□ -1.3
CHD9-206ENST00000562791 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
CHD9-206ENST00000562791 CCDC85CA6NKD9 419 aa6.9□□□□□ -1.3
CHD9-206ENST00000562791 KRIT1O00522 736 aa6.9□□□□□ -1.3
CHD9-206ENST00000562791 PDPK1O15530 556 aa6.9□□□□□ -1.3
CHD9-206ENST00000562791 COL6A2P12110 1019 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms