RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 OPLAHO14841 1288 aa19.26■□□□□ 0.67
CMTM3-205ENST00000562707 TGFB3P10600 412 aa19.26■□□□□ 0.67
CMTM3-205ENST00000562707 ERVK-21P61565 698 aa19.26■□□□□ 0.67
CMTM3-205ENST00000562707 ZNF200P98182 395 aaPredicted RBP19.26■□□□□ 0.67
CMTM3-205ENST00000562707 TRIM71Q2Q1W2 868 aaKnown RBP19.26■□□□□ 0.67
CMTM3-205ENST00000562707 CELF3Q5SZQ8 465 aaKnown RBP19.26■□□□□ 0.67
CMTM3-205ENST00000562707 VSIG10LQ86VR7 867 aa19.26■□□□□ 0.67
CMTM3-205ENST00000562707 MLXIPQ9HAP2 919 aa19.26■□□□□ 0.67
CMTM3-205ENST00000562707 MTUS1Q9ULD2 1270 aa19.26■□□□□ 0.67
CMTM3-205ENST00000562707 SORBS3O60504 671 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 LGR5O75473 907 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 GGPS1O95749 300 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-205ENST00000562707 HOXA13P31271 388 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-205ENST00000562707 TRDNQ13061 729 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 TCTN1Q2MV58 587 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 HSDL1Q3SXM5 330 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 FAM117BQ6P1L5 589 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 MTMR8Q96EF0 704 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 SUGCTQ9HAC7 445 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 SCN5AQ14524 2016 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 EMSYQ7Z589 1322 aa19.25■□□□□ 0.67
CMTM3-205ENST00000562707 LINC01553A4QN01 128 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 RSPH10B2B2RC85 870 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 GCOM1H8Y6P7 765 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-205ENST00000562707 PPP1R11O60927 126 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-205ENST00000562707 RGS20O76081 388 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 IGHDP01880 384 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 RSPH10BP0C881 870 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 POLR2MP0CAP2 368 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 CCND2P30279 289 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 PGM5Q15124 567 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 SEC23AQ15436 765 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 TRAF7Q6Q0C0 670 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 HOMER1Q86YM7 354 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 MAD2L2Q9UI95 211 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 INSL6Q9Y581 213 aa19.24■□□□□ 0.67
CMTM3-205ENST00000562707 PALM3A6NDB9 673 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-205ENST00000562707 AMHP03971 560 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 THPOP40225 353 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 MBTPS1Q14703 1052 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 SERINC5Q86VE9 423 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 FCHSD1Q86WN1 690 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 WNT8BQ93098 351 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 FAM122AQ96E09 287 aa19.23■□□□□ 0.67
CMTM3-205ENST00000562707 ERICH2A1L162 156 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 C17orf102A2RUQ5 167 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 UBA1P22314 1058 aaKnown RBP19.22■□□□□ 0.67
CMTM3-205ENST00000562707 SP2Q02086 613 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
CMTM3-205ENST00000562707 CYB5R4Q7L1T6 521 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 DBF4BQ8NFT6 615 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 ATP6V0A1Q93050 837 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 C16orf70Q9BSU1 422 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 EPHX3Q9H6B9 360 aa19.22■□□□□ 0.67
CMTM3-205ENST00000562707 PRRC2BQ5JSZ5 2229 aaKnown RBP19.21■□□□□ 0.67
CMTM3-205ENST00000562707 H3BRB1 525 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 PLA2G5P39877 138 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 HIC1Q14526 733 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 GNPTABQ3T906 1256 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 MYOCDQ8IZQ8 938 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 IL31RAQ8NI17 732 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 ZFP91Q96JP5 570 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-205ENST00000562707 PIGSQ96S52 555 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 TANC1Q9C0D5 1861 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 TUT1Q9H6E5 874 aaKnown RBP19.21■□□□□ 0.67
CMTM3-205ENST00000562707 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 XIRP2A4UGR9 3374 aa19.21■□□□□ 0.67
CMTM3-205ENST00000562707 NOP56O00567 594 aaKnown RBP19.2■□□□□ 0.66
CMTM3-205ENST00000562707 IFIT3O14879 490 aaKnown RBP19.2■□□□□ 0.66
CMTM3-205ENST00000562707 GRM4Q14833 912 aa19.2■□□□□ 0.66
CMTM3-205ENST00000562707 FBXO22Q8NEZ5 403 aa19.2■□□□□ 0.66
CMTM3-205ENST00000562707 USP26Q9BXU7 913 aa19.2■□□□□ 0.66
CMTM3-205ENST00000562707 UBE2ZQ9H832 354 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-205ENST00000562707 PNMA6FA0A0J9YX94 578 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 SMIM10L2AP0DMW4 78 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 SMIM10L2BP0DMW5 78 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 GNAT1P11488 350 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 PLEKHG4Q58EX7 1191 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 TMEM31Q5JXX7 168 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 SEPT8Q92599 483 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 GPKOWQ92917 476 aaPredicted RBP eCLIP19.19■□□□□ 0.66
CMTM3-205ENST00000562707 SAMD11Q96NU1 681 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 LRFN3Q9BTN0 628 aa19.19■□□□□ 0.66
CMTM3-205ENST00000562707 U3KPZ7 1027 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-205ENST00000562707 CAND2O75155 1236 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 STAM2O75886 525 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 LGALS2P05162 132 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 HTRA4P83105 476 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-205ENST00000562707 NEDD9Q14511 834 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
CMTM3-205ENST00000562707 PTPROQ16827 1216 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 RALYLQ86SE5 291 aaKnown RBP19.18■□□□□ 0.66
CMTM3-205ENST00000562707 C17orf80Q9BSJ5 609 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 BDP1A6H8Y1 2624 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 TET1Q8NFU7 2136 aa19.18■□□□□ 0.66
CMTM3-205ENST00000562707 TRANK1O15050 2925 aa19.17■□□□□ 0.66
CMTM3-205ENST00000562707 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms