RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 HTRA3P83110 453 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 WWC2Q6AWC2 1192 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 FNIP1Q8TF40 1166 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 RTEL1-TNFRSF6BF6WH68 1400 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 PTPRKQ15262 1439 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 SHANK2Q9UPX8 1470 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 NPHS1O60500 1241 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 SLC9A5Q14940 896 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 NCAPHQ15003 741 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 B3GNT8Q7Z7M8 397 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 COPS5Q92905 334 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 TEPSINQ96N21 525 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 KRTAP9-3Q9BYQ3 159 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 CLEC1BQ9P126 229 aa6.9□□□□□ -1.3
SMG1-206ENST00000562668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.9□□□□□ -1.31
SMG1-206ENST00000562668 DAPK1P53355 1430 aa6.9□□□□□ -1.31
SMG1-206ENST00000562668 BCORL1Q5H9F3 1711 aa6.9□□□□□ -1.31
SMG1-206ENST00000562668 C7orf72A4D263 438 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
SMG1-206ENST00000562668 SLURP1P55000 103 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 SCRN1Q12765 414 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 LCE5AQ5TCM9 118 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 LIPIQ6XZB0 460 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 TRIM59Q8IWR1 403 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 BVESQ8NE79 360 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 APBA2Q99767 749 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 ADAM7Q9H2U9 754 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 BCAS3Q9H6U6 928 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMG1-206ENST00000562668 ATP10AO60312 1499 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 AGLP35573 1532 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 ADAMTSL3P82987 1691 aa6.89□□□□□ -1.31
SMG1-206ENST00000562668 ADGRL2O95490 1459 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 PLS3P13797 630 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
SMG1-206ENST00000562668 KCNC1P48547 511 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 ERICH6BQ5W0A0 696 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 GTF2IRD2BQ6EKJ0 949 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 FRMD5Q7Z6J6 570 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 GTF2IRD2Q86UP8 949 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 MMP19Q99542 508 aa6.88□□□□□ -1.31
SMG1-206ENST00000562668 SPAG9O60271 1321 aaKnown RBP6.87□□□□□ -1.31
SMG1-206ENST00000562668 SH3D21A4FU49 640 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 NOP56O00567 594 aaKnown RBP6.87□□□□□ -1.31
SMG1-206ENST00000562668 ZBTB7AO95365 584 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 THBDP07204 575 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
SMG1-206ENST00000562668 ADGRG2Q8IZP9 1017 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 CPA5Q8WXQ8 436 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 PPP1R14AQ96A00 147 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 MRGPRX3Q96LB0 322 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
SMG1-206ENST00000562668 A0A1B0GTL3 188 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 FUCA1P04066 466 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 DLX2Q07687 328 aaPredicted RBP6.86□□□□□ -1.31
SMG1-206ENST00000562668 CACNB2Q08289 660 aaPredicted RBP6.86□□□□□ -1.31
SMG1-206ENST00000562668 SKOR2Q2VWA4 1001 aaPredicted RBP6.86□□□□□ -1.31
SMG1-206ENST00000562668 SMARCC2Q8TAQ2 1214 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 NKX2-4Q9H2Z4 354 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 GPRC5CQ9NQ84 441 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 ACTR10Q9NZ32 417 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 MROH1Q8NDA8 1641 aa6.86□□□□□ -1.31
SMG1-206ENST00000562668 EIF2AK4Q9P2K8 1649 aaKnown RBP6.86□□□□□ -1.31
SMG1-206ENST00000562668 A2MP01023 1474 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 NCOA1Q15788 1441 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 SMAD7O15105 426 aaKnown RBP6.85□□□□□ -1.31
SMG1-206ENST00000562668 NTRK1P04629 796 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 CELA3BP08861 270 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 TNNI3KQ59H18 835 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 C6orf15Q6UXA7 325 aaPredicted RBP6.85□□□□□ -1.31
SMG1-206ENST00000562668 NPLOC4Q8TAT6 608 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 PLEKHO2Q8TD55 490 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 ZNF526Q8TF50 670 aaPredicted RBP6.85□□□□□ -1.31
SMG1-206ENST00000562668 LGR4Q9BXB1 951 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 CYP26B1Q9NR63 512 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 MARCH2Q9P0N8 246 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 SIT1Q9Y3P8 196 aa6.85□□□□□ -1.31
SMG1-206ENST00000562668 RNF17Q9BXT8 1623 aaKnown RBP6.85□□□□□ -1.31
SMG1-206ENST00000562668 DHX29Q7Z478 1369 aaKnown RBP6.84□□□□□ -1.31
SMG1-206ENST00000562668 DEPDC5O75140 1603 aa6.84□□□□□ -1.31
SMG1-206ENST00000562668 MADDQ8WXG6 1647 aa6.84□□□□□ -1.31
SMG1-206ENST00000562668 DPF3Q92784 378 aa6.84□□□□□ -1.31
SMG1-206ENST00000562668 DUOX2Q9NRD8 1548 aa6.84□□□□□ -1.31
SMG1-206ENST00000562668 ROCK1Q13464 1354 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 FER1L4A9Z1Z3 1794 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 B2RBV5 119 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMG1-206ENST00000562668 C8BP07358 591 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
SMG1-206ENST00000562668 CYP4F3Q08477 520 aa6.83□□□□□ -1.32
SMG1-206ENST00000562668 FAM50AQ14320 339 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms