RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 FAM110CQ1W6H9 321 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 AKNAD1Q5T1N1 836 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 TMEM164Q5U3C3 297 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 RASGRP2Q7LDG7 609 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 RAET1EQ8TD07 263 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 SH3TC2Q8TF17 1288 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 RUFY2Q8WXA3 655 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 DSCC1Q9BVC3 393 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 PORCNQ9H237 461 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 NDFIP2Q9NV92 336 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 SRRDQ9UH36 339 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 STX8Q9UNK0 236 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 TAF6LQ9Y6J9 622 aa6.84□□□□□ -1.31
CDH13-206ENST00000562601 ZMYM6O95789 1325 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 B4E1Z4 1266 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 WDR46O15213 610 aaKnown RBP6.83□□□□□ -1.32
CDH13-206ENST00000562601 BNIP3LO60238 219 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 FGRP09769 529 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 ELNP15502 786 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 MCCP23508 829 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 SNAP25P60880 206 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 PLS1Q14651 629 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 IMMTQ16891 758 aaKnown RBP6.83□□□□□ -1.32
CDH13-206ENST00000562601 SLC9C1Q4G0N8 1177 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 SLFN13Q68D06 897 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 LRRC69Q6ZNQ3 347 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 CCAR1Q8IX12 1150 aaKnown RBP6.83□□□□□ -1.32
CDH13-206ENST00000562601 STAG1Q8WVM7 1258 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 LPAR1Q92633 364 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 CLP1Q92989 425 aaKnown RBP6.83□□□□□ -1.32
CDH13-206ENST00000562601 MKL1Q969V6 931 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 COA7Q96BR5 231 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 ABHD17AQ96GS6 310 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 CWC22Q9HCG8 908 aaKnown RBP6.83□□□□□ -1.32
CDH13-206ENST00000562601 HOXC10Q9NYD6 342 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 MORF4L1Q9UBU8 362 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 BIN2Q9UBW5 565 aaPredicted RBP6.83□□□□□ -1.32
CDH13-206ENST00000562601 CTNNA3Q9UI47 895 aa6.83□□□□□ -1.32
CDH13-206ENST00000562601 PLIN4Q96Q06 1357 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 TNRC18O15417 2968 aaPredicted RBP6.82□□□□□ -1.32
CDH13-206ENST00000562601 RAD50Q92878 1312 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 TMEM232C9JQI7 657 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 KHNYNO15037 678 aaKnown RBP6.82□□□□□ -1.32
CDH13-206ENST00000562601 ADCY3O60266 1144 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 PRMT3O60678 531 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 LGR5O75473 907 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 CYP21A2P08686 494 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 BMP4P12644 408 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 CYP2B6P20813 491 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 HOXD10P28358 340 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 FLT3LGP49771 235 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 TMEM132BQ14DG7 1078 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 BMP2KLQ5H9B9 411 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 KCTD1Q719H9 257 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 CHST3Q7LGC8 479 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 GPR142Q7Z601 462 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 PLEKHH3Q7Z736 793 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 TMEM47Q9BQJ4 181 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 MOV10L1Q9BXT6 1211 aaKnown RBP6.82□□□□□ -1.32
CDH13-206ENST00000562601 LSG1Q9H089 658 aaKnown RBP6.82□□□□□ -1.32
CDH13-206ENST00000562601 RNF41Q9H4P4 317 aaPredicted RBP6.82□□□□□ -1.32
CDH13-206ENST00000562601 ZSWIM5Q9P217 1185 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 GJD2Q9UKL4 321 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 RABGAP1Q9Y3P9 1069 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 RBM8AQ9Y5S9 174 aaKnown RBP6.82□□□□□ -1.32
CDH13-206ENST00000562601 SMCHD1A6NHR9 2005 aa6.82□□□□□ -1.32
CDH13-206ENST00000562601 A0A0G2JMZ2 1700 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 FRMPD2Q68DX3 1309 aaPredicted RBP6.81□□□□□ -1.32
CDH13-206ENST00000562601 DCDC2BA2VCK2 349 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 VWA5AO00534 786 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 CDC45O75419 566 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 MAPTP10636 758 aaKnown RBP6.81□□□□□ -1.32
CDH13-206ENST00000562601 BMP3P12645 472 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 ERCC3P19447 782 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 MAPK4P31152 587 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 GRK4P32298 578 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 SLC16A2P36021 539 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 TNP2Q05952 138 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 IKQ13123 557 aaPredicted RBP6.81□□□□□ -1.32
CDH13-206ENST00000562601 CCDC96Q2M329 555 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 IER5Q5VY09 327 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 TTBK2Q6IQ55 1244 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 RCSD1Q6JBY9 416 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 LBX2Q6XYB7 198 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 KIAA1211Q6ZU35 1233 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 STOX1Q6ZVD7 989 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 CYB5R4Q7L1T6 521 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 NCAPG2Q86XI2 1143 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 GMCL1P1Q8NEA9 526 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
CDH13-206ENST00000562601 ESR2Q92731 530 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 MAP4K1Q92918 833 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 SUSD3Q96L08 255 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 PRIMPOLQ96LW4 560 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 ARID3AQ99856 593 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 SLF1Q9BQI6 1058 aa6.81□□□□□ -1.32
CDH13-206ENST00000562601 SPATC1LQ9H0A9 340 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms