RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 ERCC6LQ2NKX8 1250 aa16.03■□□□□ 0.16
SPG7-203ENST00000561702 FBXO38Q6PIJ6 1188 aa16.03■□□□□ 0.16
SPG7-203ENST00000561702 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
SPG7-203ENST00000561702 KRT26Q7Z3Y9 468 aa16.03■□□□□ 0.16
SPG7-203ENST00000561702 CABP7Q86V35 215 aa16.03■□□□□ 0.16
SPG7-203ENST00000561702 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
SPG7-203ENST00000561702 RLFQ13129 1914 aa16.03■□□□□ 0.16
SPG7-203ENST00000561702 BICDL2A1A5D9 508 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 KIF5CO60282 957 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 VCAM1P19320 739 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 USP14P54578 494 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 BACE1P56817 501 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 CYP26C1Q6V0L0 522 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 P2RX7Q99572 595 aaKnown RBP16.02■□□□□ 0.16
SPG7-203ENST00000561702 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.02■□□□□ 0.163e-6■□□□□ 9.3
SPG7-203ENST00000561702 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 V9GYY5 206 aaPredicted RBP16.02■□□□□ 0.16
SPG7-203ENST00000561702 PTPRFP10586 1907 aa16.02■□□□□ 0.16
SPG7-203ENST00000561702 POTECB2RU33 542 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 TADA3O75528 432 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.15
SPG7-203ENST00000561702 COBLL1Q53SF7 1204 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 TAF1DQ9H5J8 278 aaPredicted RBP16.02■□□□□ 0.15
SPG7-203ENST00000561702 MYO1AQ9UBC5 1043 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 MAGEC2Q9UBF1 373 aaPredicted RBP16.02■□□□□ 0.15
SPG7-203ENST00000561702 MRFAP1Q9Y605 127 aa16.02■□□□□ 0.15
SPG7-203ENST00000561702 SOWAHDA6NJG2 315 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 KLRC4O43908 158 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 CDC25AP30304 524 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.01■□□□□ 0.15
SPG7-203ENST00000561702 ZC3H15Q8WU90 426 aaKnown RBP16.01■□□□□ 0.15
SPG7-203ENST00000561702 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 CALML4Q96GE6 196 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 C7orf25Q9BPX7 421 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 ANO3Q9BYT9 981 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 RAB34Q9BZG1 259 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 VPS16Q9H269 839 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 ABHD10Q9NUJ1 306 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 GDAQ9Y2T3 454 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 SPDYE4A6NLX3 237 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 TDP2O95551 362 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 BMS1Q14692 1282 aaKnown RBP16.01■□□□□ 0.15
SPG7-203ENST00000561702 RAD9BQ6WBX8 426 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 KRT222Q8N1A0 295 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 TANGO6Q9C0B7 1094 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 RPAP3Q9H6T3 665 aaPredicted RBP16.01■□□□□ 0.15
SPG7-203ENST00000561702 SNCAIPQ9Y6H5 919 aa16.01■□□□□ 0.15
SPG7-203ENST00000561702 ZNF536O15090 1300 aa16■□□□□ 0.15
SPG7-203ENST00000561702 LGALS16A8MUM7 142 aa16■□□□□ 0.15
SPG7-203ENST00000561702 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
SPG7-203ENST00000561702 UBXN1Q04323 297 aa16■□□□□ 0.15
SPG7-203ENST00000561702 TRAF1Q13077 416 aa16■□□□□ 0.15
SPG7-203ENST00000561702 AP3B2Q13367 1082 aa16■□□□□ 0.15
SPG7-203ENST00000561702 VGLL4Q14135 290 aa16■□□□□ 0.15
SPG7-203ENST00000561702 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
SPG7-203ENST00000561702 POTEDQ86YR6 584 aa16■□□□□ 0.15
SPG7-203ENST00000561702 GPR161Q8N6U8 529 aaKnown RBP16■□□□□ 0.15
SPG7-203ENST00000561702 PRPF38AQ8NAV1 312 aaKnown RBP16■□□□□ 0.15
SPG7-203ENST00000561702 IQCDQ96DY2 449 aa16■□□□□ 0.15
SPG7-203ENST00000561702 CDCA5Q96FF9 252 aa16■□□□□ 0.15
SPG7-203ENST00000561702 C12orf42Q96LP6 360 aa16■□□□□ 0.15
SPG7-203ENST00000561702 WDR24Q96S15 920 aa16■□□□□ 0.15
SPG7-203ENST00000561702 CARD6Q9BX69 1037 aa16■□□□□ 0.15
SPG7-203ENST00000561702 FAM53CQ9NYF3 392 aa16■□□□□ 0.15
SPG7-203ENST00000561702 STK17AQ9UEE5 414 aa16■□□□□ 0.15
SPG7-203ENST00000561702 COL11A1P12107 1806 aaPredicted RBP16■□□□□ 0.15
SPG7-203ENST00000561702 ATP8B1O43520 1251 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 SLC37A4O43826 429 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 PLCG1P19174 1290 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 DNM2P50570 870 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 TSR1Q2NL82 804 aaKnown RBP15.99■□□□□ 0.15
SPG7-203ENST00000561702 EAPPQ56P03 285 aaPredicted RBP15.99■□□□□ 0.15
SPG7-203ENST00000561702 CNNM4Q6P4Q7 775 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 RETREG2Q8NC44 543 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 TRIM47Q96LD4 638 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 DESI2Q9BSY9 194 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 LRRC27Q9C0I9 530 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 TAB2Q9NYJ8 693 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 AFG3L2Q9Y4W6 797 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 C19orf81C9J6K1 198 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 FANCGO15287 622 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 FLOT1O75955 427 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPG7-203ENST00000561702 HMGCS2P54868 508 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 PPP2R3AQ06190 1150 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 GABPB1Q06547 395 aaPredicted RBP15.99■□□□□ 0.15
SPG7-203ENST00000561702 PPP4R3AQ6IN85 833 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 TRIM9Q9C026 710 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 MRPL44Q9H9J2 332 aaKnown RBP15.99■□□□□ 0.15
SPG7-203ENST00000561702 PPP1R9AQ9ULJ8 1098 aa15.99■□□□□ 0.15
SPG7-203ENST00000561702 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms