RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 PCNX4Q63HM2 1172 aa20.71■□□□□ 0.91
FANCA-206ENST00000561660 VWCEQ96DN2 955 aa20.71■□□□□ 0.91
FANCA-206ENST00000561660 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.71■□□□□ 0.914e-11■□□□□ 10.6
FANCA-206ENST00000561660 WNT8AQ9H1J5 351 aa20.71■□□□□ 0.91
FANCA-206ENST00000561660 STAM2O75886 525 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 ACRP10323 421 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 PSMA5P28066 241 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 METAP2P50579 478 aaKnown RBP eCLIP20.7■□□□□ 0.9
FANCA-206ENST00000561660 CCL23P55773 120 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 PPIGQ13427 754 aaKnown RBP eCLIP20.7■□□□□ 0.91e-14■■■□□ 18.4
FANCA-206ENST00000561660 FAM47CQ5HY64 1035 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 TMEM240Q5SV17 173 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 TMEM199Q8N511 208 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 SPATA33Q96N06 139 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 CTAGE1Q96RT6 745 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 ZSWIM6Q9HCJ5 1215 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 NAP1L2Q9ULW6 460 aaPredicted RBP20.7■□□□□ 0.9
FANCA-206ENST00000561660 TELO2Q9Y4R8 837 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 COL6A3P12111 3177 aa20.7■□□□□ 0.9
FANCA-206ENST00000561660 STXBP3O00186 592 aa20.69■□□□□ 0.9
FANCA-206ENST00000561660 ZNF286BP0CG31 522 aa20.69■□□□□ 0.9
FANCA-206ENST00000561660 CHMP4BP1P59074 171 aa20.69■□□□□ 0.9
FANCA-206ENST00000561660 PTPN11Q06124 597 aaPredicted RBP20.69■□□□□ 0.9
FANCA-206ENST00000561660 RNPC3Q96LT9 517 aaKnown RBP20.69■□□□□ 0.9
FANCA-206ENST00000561660 NID2Q14112 1375 aa20.69■□□□□ 0.9
FANCA-206ENST00000561660 CDH23Q9H251 3354 aa20.69■□□□□ 0.9
FANCA-206ENST00000561660 HAS3O00219 553 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 F2P00734 622 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 SUPT20HL2P0C7V6 817 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 PSEN2P49810 448 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 EVCP57679 992 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 GNPTABQ3T906 1256 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 GDF6Q6KF10 455 aaPredicted RBP20.68■□□□□ 0.9
FANCA-206ENST00000561660 XRRA1Q6P2D8 792 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 RUFY3Q7L099 469 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 SESTD1Q86VW0 696 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 DEFB123Q8N688 67 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 SCLYQ96I15 445 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 PCDHA6Q9UN73 950 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 PCDHA8Q9Y5H6 950 aa20.68■□□□□ 0.9
FANCA-206ENST00000561660 FIBPO43427 364 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 PPFIA4O75335 1185 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 ITGB5P18084 799 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 NAPAP54920 295 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
FANCA-206ENST00000561660 NTRK3Q16288 839 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 RASIP1Q5U651 963 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 ZNF365Q70YC5 407 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 C16orf70Q9BSU1 422 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 IL23AQ9NPF7 189 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 BARHL2Q9NY43 387 aa20.67■□□□□ 0.9
FANCA-206ENST00000561660 PDIA3P30101 505 aaKnown RBP20.66■□□□□ 0.9
FANCA-206ENST00000561660 HIC1Q14526 733 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 MFSD10Q14728 455 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 PKN1Q16512 942 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 PFKFB3Q16875 520 aaPredicted RBP20.66■□□□□ 0.9
FANCA-206ENST00000561660 FAM109BQ6ICB4 259 aaPredicted RBP20.66■□□□□ 0.9
FANCA-206ENST00000561660 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 CYFIP1Q7L576 1253 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 ALG1Q9BT22 464 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 HDAC6Q9UBN7 1215 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 UBIAD1Q9Y5Z9 338 aa20.66■□□□□ 0.9
FANCA-206ENST00000561660 CCDC196A0A1B0GTZ2 297 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 SMCO2A6NFE2 343 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 ADAMTS3O15072 1205 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 ATP9AO75110 1047 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 SMAD3P84022 425 aaKnown RBP20.65■□□□□ 0.9
FANCA-206ENST00000561660 NEDD9Q14511 834 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 PTGISQ16647 500 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 KIAA0753Q2KHM9 967 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 METTL7BQ6UX53 244 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 PGBD1Q96JS3 809 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 SENP7Q9BQF6 1050 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 UPF3BQ9BZI7 483 aaKnown RBP20.65■□□□□ 0.9
FANCA-206ENST00000561660 TM6SF1Q9BZW5 370 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 MTMR10Q9NXD2 777 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 GTF2IRD1Q9UHL9 959 aa20.65■□□□□ 0.9
FANCA-206ENST00000561660 SPDYE3A6NKU9 549 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 hCG_1984214I3L0E3 225 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 PPFIA3O75145 1194 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 CLK2P49760 499 aaKnown RBP20.64■□□□□ 0.89
FANCA-206ENST00000561660 ADCY7P51828 1080 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 ZNF713Q8N859 430 aaPredicted RBP20.64■□□□□ 0.89
FANCA-206ENST00000561660 DHX38Q92620 1227 aaKnown RBP20.64■□□□□ 0.89
FANCA-206ENST00000561660 PHKBQ93100 1093 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 GPRASP2Q96D09 838 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 GPR20Q99678 358 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
FANCA-206ENST00000561660 NCOA5Q9HCD5 579 aaKnown RBP20.64■□□□□ 0.89
FANCA-206ENST00000561660 TMEM260Q9NX78 707 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 CXXC1Q9P0U4 656 aaPredicted RBP20.64■□□□□ 0.89
FANCA-206ENST00000561660 CYP46A1Q9Y6A2 500 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 MYH7BA7E2Y1 1941 aa20.64■□□□□ 0.89
FANCA-206ENST00000561660 RBAK-RBAKDNI3L0D1 243 aa20.63■□□□□ 0.89
FANCA-206ENST00000561660 PRPF3O43395 683 aaKnown RBP20.63■□□□□ 0.89
FANCA-206ENST00000561660 SCG2P13521 617 aa20.63■□□□□ 0.89
FANCA-206ENST00000561660 KCNA2P16389 499 aa20.63■□□□□ 0.89
FANCA-206ENST00000561660 CCT2P78371 535 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms