RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
CCDC113-203ENST00000561517 SEMA3FQ13275 785 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 SHHQ15465 462 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 UBE2SQ16763 222 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 C9orf50Q5SZB4 431 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 KAT2BQ92831 832 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 LRCH3Q96II8 777 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 RIC8AQ9NPQ8 531 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
CCDC113-203ENST00000561517 FIBPO43427 364 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 SUPT20HL2P0C7V6 817 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 PDIA3P30101 505 aaKnown RBP17.77■□□□□ 0.44
CCDC113-203ENST00000561517 EPHB4P54760 987 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 NTRK3Q16288 839 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 PFKFB3Q16875 520 aaPredicted RBP17.77■□□□□ 0.44
CCDC113-203ENST00000561517 NOC4LQ9BVI4 516 aaKnown RBP17.77■□□□□ 0.44
CCDC113-203ENST00000561517 RTEL1Q9NZ71 1219 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.44
CCDC113-203ENST00000561517 SPDYE3A6NKU9 549 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 PRPF3O43395 683 aaKnown RBP17.76■□□□□ 0.43
CCDC113-203ENST00000561517 PPFIA4O75335 1185 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 SCG2P13521 617 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 NEDD9Q14511 834 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 HSDL1Q3SXM5 330 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 GPR153Q6NV75 609 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 SESTD1Q86VW0 696 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 SPATA33Q96N06 139 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 UPF3BQ9BZI7 483 aaKnown RBP17.76■□□□□ 0.43
CCDC113-203ENST00000561517 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 HIPK3Q9H422 1215 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 TRMT13Q9NUP7 481 aaKnown RBP17.76■□□□□ 0.43
CCDC113-203ENST00000561517 SCN5AQ14524 2016 aa17.76■□□□□ 0.43
CCDC113-203ENST00000561517 SMCO2A6NFE2 343 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 HAS3O00219 553 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 F2P00734 622 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 IFNAR1P17181 557 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 CYP2C18P33260 490 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 ADCY7P51828 1080 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 ANAPC15P60006 121 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 PPIGQ13427 754 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC113-203ENST00000561517 PKN1Q16512 942 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 FAM47CQ5HY64 1035 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 NLRX1Q86UT6 975 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 TMEM199Q8N511 208 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 GPRASP2Q96D09 838 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
CCDC113-203ENST00000561517 BCAS3Q9H6U6 928 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 MLXIPQ9HAP2 919 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 UBIAD1Q9Y5Z9 338 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 SZT2Q5T011 3432 aa17.75■□□□□ 0.43
CCDC113-203ENST00000561517 UMODL1Q5DID0 1318 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 TET1Q8NFU7 2136 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 ESYT2A0FGR8 921 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 FOSP01100 380 aaPredicted RBP17.74■□□□□ 0.43
CCDC113-203ENST00000561517 CSF2RAP15509 400 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
CCDC113-203ENST00000561517 PSEN2P49810 448 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 METTL7BQ6UX53 244 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 PPP1R13LQ8WUF5 828 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 IL17RAQ96F46 866 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 KATNAL1Q9BW62 490 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 RNF26Q9BY78 433 aaPredicted RBP17.74■□□□□ 0.43
CCDC113-203ENST00000561517 EHMT1Q9H9B1 1298 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 MYO9BQ13459 2157 aa17.74■□□□□ 0.43
CCDC113-203ENST00000561517 TANC1Q9C0D5 1861 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 SORBS3O60504 671 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
CCDC113-203ENST00000561517 ZNF286BP0CG31 522 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 CYP2C9P11712 490 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 ITGB5P18084 799 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 CCT2P78371 535 aaKnown RBP17.73■□□□□ 0.43
CCDC113-203ENST00000561517 AP3B2Q13367 1082 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 CYFIP1Q7L576 1253 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 PHKBQ93100 1093 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 CDHR1Q96JP9 859 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 C16orf70Q9BSU1 422 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 ZMYND12Q9H0C1 365 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
CCDC113-203ENST00000561517 NCOA5Q9HCD5 579 aaKnown RBP17.73■□□□□ 0.43
CCDC113-203ENST00000561517 MAFGO15525 162 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 MFSD10Q14728 455 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 KIAA0753Q2KHM9 967 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 TMEM240Q5SV17 173 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
CCDC113-203ENST00000561517 CTAGE1Q96RT6 745 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC113-203ENST00000561517 ANO3Q9BYT9 981 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 JADE2Q9NQC1 790 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 GTF2IRD1Q9UHL9 959 aa17.72■□□□□ 0.43
CCDC113-203ENST00000561517 KCNA2P16389 499 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 CCL23P55773 120 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 CHMP4BP1P59074 171 aa17.71■□□□□ 0.43
CCDC113-203ENST00000561517 AKAP17AQ02040 695 aaKnown RBP17.71■□□□□ 0.43
CCDC113-203ENST00000561517 GDF6Q6KF10 455 aaPredicted RBP17.71■□□□□ 0.43
CCDC113-203ENST00000561517 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms