RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SYN1P17600 705 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 BUD31P41223 144 aaPredicted RBP4.32□□□□□ -1.72
SPG11-225ENST00000561391 ASPAP45381 313 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 CDK8P49336 464 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 MTHFSP49914 203 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 TNIP1Q15025 636 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 KCNMB1Q16558 191 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 OGFOD3Q6PK18 319 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 C12orf40Q86WS4 652 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 NBPF5PQ86XG9 351 aaPredicted RBP4.32□□□□□ -1.72
SPG11-225ENST00000561391 ZSWIM9Q86XI8 627 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 KIAA0825Q8IV33 1275 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 LRRC56Q8IYG6 542 aaPredicted RBP4.32□□□□□ -1.72
SPG11-225ENST00000561391 FAM181AQ8N9Y4 354 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 FBXO27Q8NI29 283 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 MYLIPQ8WY64 445 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 RHOVQ96L33 236 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 PPP1R16BQ96T49 567 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 LRFN3Q9BTN0 628 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 WDR18Q9BV38 432 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 C1QTNF1Q9BXJ1 281 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 TGIF2Q9GZN2 237 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 ACSS3Q9H6R3 686 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 KRT82Q9NSB4 513 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 FAM105AQ9NUU6 356 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 FAM53CQ9NYF3 392 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 UBP1Q9NZI7 540 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 SUPT16HQ9Y5B9 1047 aaKnown RBP4.32□□□□□ -1.72
SPG11-225ENST00000561391 LAMA3Q16787 3333 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 ZNF831Q5JPB2 1677 aa4.32□□□□□ -1.72
SPG11-225ENST00000561391 EYSQ5T1H1 3165 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 PRAMEF27A3QJZ7 478 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 RNGTTO60942 597 aaKnown RBP4.31□□□□□ -1.72
SPG11-225ENST00000561391 HSP90AB1P08238 724 aaKnown RBP4.31□□□□□ -1.72
SPG11-225ENST00000561391 MCM4P33991 863 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 CD96P40200 585 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 MAGEA10P43363 369 aaPredicted RBP4.31□□□□□ -1.72
SPG11-225ENST00000561391 EIF5P55010 431 aaKnown RBP4.31□□□□□ -1.72
SPG11-225ENST00000561391 ID3Q02535 119 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 APOBRQ0VD83 1088 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 MESP2Q0VG99 397 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 PAK2Q13177 524 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 CRHR2Q13324 411 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 SLC39A6Q13433 755 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 TCIRG1Q13488 830 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 PRKG1Q13976 671 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 INPP5AQ14642 412 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 SEZ6Q53EL9 994 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 FAM109BQ6ICB4 259 aaPredicted RBP4.31□□□□□ -1.72
SPG11-225ENST00000561391 UBE2Q1Q7Z7E8 422 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 GATAD2BQ8WXI9 593 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 GAL3ST3Q96A11 431 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 PLPPR2Q96GM1 343 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 TERF2IPQ9NYB0 399 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 PPP1R9AQ9ULJ8 1098 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 BCORQ6W2J9 1755 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 ANKRD26Q9UPS8 1709 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 PRUNE2Q8WUY3 3088 aa4.31□□□□□ -1.72
SPG11-225ENST00000561391 KLRG2A4D1S0 409 aaPredicted RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 IGF2BP3O00425 579 aaKnown RBP eCLIP4.3□□□□□ -1.72
SPG11-225ENST00000561391 DYNC1LI2O43237 492 aaPredicted RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 GREM1O60565 184 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 TSPAN15O95858 294 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 ZSCAN22P10073 491 aaPredicted RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 CFPP27918 469 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 GJA8P48165 433 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 FKBP1BP68106 108 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 PRKCQQ04759 706 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 GNL2Q13823 731 aaKnown RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 ARHGEF6Q15052 776 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 KIF4BQ2VIQ3 1234 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 ZC3H12AQ5D1E8 599 aaKnown RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 PPM1JQ5JR12 505 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 WIPI1Q5MNZ9 446 aaPredicted RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 ANGEL2Q5VTE6 544 aaKnown RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 LRFN4Q6PJG9 635 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 HDXQ7Z353 690 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 C7orf61Q8IZ16 206 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 EAF1Q96JC9 268 aaPredicted RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 HRASLS5Q96KN8 279 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 EPHX3Q9H6B9 360 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 SSU72Q9NP77 194 aaKnown RBP4.3□□□□□ -1.72
SPG11-225ENST00000561391 C1GALT1Q9NS00 363 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 GGA3Q9NZ52 723 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 LMCD1Q9NZU5 365 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 VAV3Q9UKW4 847 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 JAG2Q9Y219 1238 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 ARFGEF2Q9Y6D5 1785 aa4.3□□□□□ -1.72
SPG11-225ENST00000561391 EDC4Q6P2E9 1401 aaKnown RBP4.29□□□□□ -1.72
SPG11-225ENST00000561391 A0A1W2PP64 1363 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 TONSLQ96HA7 1378 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 WASHC2AQ641Q2 1341 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 CDHR2Q9BYE9 1310 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 FAM221AA4D161 298 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 YDJCA8MPS7 323 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 CILPO75339 1184 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 TFRCP02786 760 aaKnown RBP4.29□□□□□ -1.72
SPG11-225ENST00000561391 GJB1P08034 283 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 FAM87AP0C7U9 286 aa4.29□□□□□ -1.72
SPG11-225ENST00000561391 CCL5P13501 91 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms