RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 AIFM3Q96NN9 605 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
TPM1-229ENST00000561242 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 DDX25Q9UHL0 483 aaKnown RBP12.15□□□□□ -0.46
TPM1-229ENST00000561242 OGDHLQ9ULD0 1010 aa12.15□□□□□ -0.46
TPM1-229ENST00000561242 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 DCDC2CA8MYV0 355 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 SPATA31C2B4DYI2 1134 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 OPLAHO14841 1288 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 BACH1O14867 736 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 EVI5O60447 810 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 DKC1O60832 514 aaKnown RBP eCLIP12.14□□□□□ -0.47
TPM1-229ENST00000561242 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 GJA9P57773 515 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 KCNA10Q16322 511 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 INF2Q27J81 1249 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 TMEM266Q2M3C6 531 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 TAPT1Q6NXT6 567 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 MIS18BP1Q6P0N0 1132 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 CYFIP1Q7L576 1253 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 FBXO18Q8NFZ0 1043 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 RASGRP4Q8TDF6 673 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 GLG1Q92896 1179 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
TPM1-229ENST00000561242 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
TPM1-229ENST00000561242 SENP7Q9BQF6 1050 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
TPM1-229ENST00000561242 TEKT3Q9BXF9 490 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 RAB34Q9BZG1 259 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 DDX41Q9UJV9 622 aaKnown RBP12.14□□□□□ -0.47
TPM1-229ENST00000561242 CEP131Q9UPN4 1083 aa12.14□□□□□ -0.47
TPM1-229ENST00000561242 MROH7Q68CQ1 1323 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 PTPRFP10586 1907 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 RBM47A0AV96 593 aaKnown RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 BTBD18B2RXH4 712 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 SORBS3O60504 671 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 GAS7O60861 476 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 PPFIA4O75335 1185 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 CYP3A4P08684 503 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 GNAT1P11488 350 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 ICAM3P32942 547 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 MLLT1Q03111 559 aaPredicted RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 LRRC41Q15345 812 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 CELF3Q5SZQ8 465 aaKnown RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 TRPV1Q8NER1 839 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 SEPT1Q8WYJ6 367 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 CCDC43Q96MW1 224 aaKnown RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 INPP4AQ96PE3 977 aaPredicted RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 JPH1Q9HDC5 661 aaPredicted RBP12.13□□□□□ -0.47
TPM1-229ENST00000561242 SLC9A2Q9UBY0 812 aa12.13□□□□□ -0.47
TPM1-229ENST00000561242 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.12□□□□□ -0.47
TPM1-229ENST00000561242 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
TPM1-229ENST00000561242 PSAPP07602 524 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
TPM1-229ENST00000561242 TRAPPC10P48553 1259 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 ATN1P54259 1190 aaPredicted RBP12.12□□□□□ -0.47
TPM1-229ENST00000561242 KRT76Q01546 638 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 UTP14CQ5TAP6 766 aaKnown RBP12.12□□□□□ -0.47
TPM1-229ENST00000561242 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 TYW1BQ6NUM6 668 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 METTL7BQ6UX53 244 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 PPTC7Q8NI37 304 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 ERMNQ8TAM6 284 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 AFG1LQ8WV93 481 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 ATP6V1DQ9Y5K8 247 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 UBIAD1Q9Y5Z9 338 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
TPM1-229ENST00000561242 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 A0A0U1RQG5 324 aaPredicted RBP12.11□□□□□ -0.47
TPM1-229ENST00000561242 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
TPM1-229ENST00000561242 BMP15O95972 392 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 ASGR1P07306 291 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 ACLYP53396 1101 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 BEX3Q00994 111 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 CUL4AQ13619 759 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 CALCRLQ16602 461 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 RILPL1Q5EBL4 403 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 LHX8Q68G74 356 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 BRAPQ7Z569 592 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 FGD4Q96M96 766 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
TPM1-229ENST00000561242 LBHD1Q9BQE6 289 aaPredicted RBP12.11□□□□□ -0.47
TPM1-229ENST00000561242 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 ZSCAN16Q9H4T2 348 aaPredicted RBP12.11□□□□□ -0.47
TPM1-229ENST00000561242 ATP11BQ9Y2G3 1177 aa12.11□□□□□ -0.47
TPM1-229ENST00000561242 ELP1O95163 1332 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms