RNA–Protein interactions for RNA: ENST00000561009.5

IRF9-212, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-212ENST00000561009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
IRF9-212ENST00000561009 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 DBF4BQ8NFT6 615 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 SEPT8Q92599 483 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 SPATA33Q96N06 139 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 PRKAG3Q9UGI9 489 aa13.53□□□□□ -0.24
IRF9-212ENST00000561009 C17orf102A2RUQ5 167 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 HAS3O00219 553 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 NCK2O43639 380 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 UPP2O95045 317 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 MYCLP12524 364 aaPredicted RBP13.52□□□□□ -0.25
IRF9-212ENST00000561009 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
IRF9-212ENST00000561009 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 PABPC5Q96DU9 382 aaKnown RBP13.52□□□□□ -0.25
IRF9-212ENST00000561009 FAM227BQ96M60 508 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 PXMP2Q9NR77 195 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 COL20A1Q9P218 1284 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 CCDC171Q6TFL3 1326 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 LCTP09848 1927 aa13.52□□□□□ -0.25
IRF9-212ENST00000561009 NCOR1O75376 2440 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 H3BNC9 293 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 GGPS1O95749 300 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 GNAT1P11488 350 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 MRE11P49959 708 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 TCTN1Q2MV58 587 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 DIEXFQ68CQ4 756 aaKnown RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 SERINC5Q86VE9 423 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 POP1Q99575 1024 aaKnown RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 CLDND1Q9NY35 253 aa13.51□□□□□ -0.25
IRF9-212ENST00000561009 MAP3K20Q9NYL2 800 aaKnown RBP13.51□□□□□ -0.25
IRF9-212ENST00000561009 NOP56O00567 594 aaKnown RBP13.5□□□□□ -0.25
IRF9-212ENST00000561009 SORBS3O60504 671 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 CAND2O75155 1236 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 TGFB3P10600 412 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 TRAF1Q13077 416 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 MBTPS1Q14703 1052 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 CELF3Q5SZQ8 465 aaKnown RBP13.5□□□□□ -0.25
IRF9-212ENST00000561009 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 TRAF7Q6Q0C0 670 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 TBC1D10CQ8IV04 446 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 APBB2Q92870 758 aa13.5□□□□□ -0.25
IRF9-212ENST00000561009 IFIH1Q9BYX4 1025 aaKnown RBP13.5□□□□□ -0.25
IRF9-212ENST00000561009 NEDD4P46934 1319 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 H3BRB1 525 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 KDM4AO75164 1064 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 CCND2P30279 289 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 PDE1AP54750 535 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
IRF9-212ENST00000561009 HSDL1Q3SXM5 330 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 ZNF589Q86UQ0 364 aaPredicted RBP13.49□□□□□ -0.25
IRF9-212ENST00000561009 ADHFE1Q8IWW8 467 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 WNT8BQ93098 351 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 TOP1MTQ969P6 601 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 RILPL2Q969X0 211 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 ZSCAN10Q96SZ4 725 aaPredicted RBP13.49□□□□□ -0.25
IRF9-212ENST00000561009 PDCD2LQ9BRP1 358 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 TUT1Q9H6E5 874 aaKnown RBP13.49□□□□□ -0.25
IRF9-212ENST00000561009 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
IRF9-212ENST00000561009 SALL3Q9BXA9 1300 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 CTSHP09668 335 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
IRF9-212ENST00000561009 CTNNB1P35222 781 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 HSD17B4P51659 736 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 NHLH1Q02575 133 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 ZP2Q05996 745 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 GNPTABQ3T906 1256 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 FIBCD1Q8N539 461 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 SAMD3Q8N6K7 520 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 IL17RAQ96F46 866 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
IRF9-212ENST00000561009 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
IRF9-212ENST00000561009 ZNF215Q9UL58 517 aaPredicted RBP13.48□□□□□ -0.25
IRF9-212ENST00000561009 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
IRF9-212ENST00000561009 RB1P06400 928 aa13.47□□□□□ -0.25
IRF9-212ENST00000561009 SMIM10L2AP0DMW4 78 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms